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13_1_20cm_4_scaffold_16061

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_16061_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

205..549
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036173B2
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
hypothetical protein
13_1_20cm_4_scaffold_16061_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(694..1488)
DNA (795bp) protein (265aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=3937090 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_16061_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


1618..2856
DNA (1239bp) protein (413aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037B7941
valS; Valyl-tRNA synthetase
13_1_20cm_4_scaffold_16061_4
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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2906..3481
DNA (576bp) protein (192aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DW92_METI4
Suspect SCG annotation. See neighboring gene [13_1_20cm_4_scaffold_16061_3].
valS; Valyl-tRNA synthetase
13_1_20cm_4_scaffold_16061_5
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3502..4047
DNA (546bp) protein (182aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valyl-tRNA synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017462CE
valyl-tRNA synthetase
13_1_20cm_4_scaffold_16061_6
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3998..4966)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
Uncharacterized protein {ECO:0000313|EMBL:KEZ77878.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
13_1_20cm_4_scaffold_16061_7
unknown

Not on your lists

comp(5166..5711)
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_4_scaffold_16061_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5770..6759
DNA (990bp) protein (330aa)
Carbon starvation protein CstA n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS08_OPITP
Carbon starvation protein CstA {ECO:0000313|EMBL:ACB74684.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246
carbon starvation protein CstA
13_1_20cm_4_scaffold_16061_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6835..8331)
DNA (1497bp) protein (499aa)
Chloride peroxidase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YZW8_DESAF
chloride peroxidase Tax=RBG_16_Anaeromyxobacter_69_14_curated
chloride peroxidase
13_1_20cm_4_scaffold_16061_10
unknown

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comp(8437..8700)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_4_scaffold_16061_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8697..9251)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19551.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_16061_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9253..9807)
DNA (555bp) protein (185aa)
Fimbrial assembly family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D8_9BACT
Fimbrial assembly family protein {ECO:0000313|EMBL:EDY19550.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
13_1_20cm_4_scaffold_16061_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9746..10870)
DNA (1125bp) protein (375aa)
Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D7_9BACT
Tfp pilus assembly protein ATPase PilM-like protein {ECO:0000313|EMBL:EDY19549.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
13_1_20cm_4_scaffold_16061_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11091..12497)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60730.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_20cm_4_scaffold_16061_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12778..13422)
DNA (645bp) protein (215aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H4_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY18804.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
hypothetical protein
13_1_20cm_4_scaffold_16061_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13419..15137)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18803.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_16061_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15149..15961)
DNA (813bp) protein (271aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H2_9BACT
von Willebrand factor type A {ECO:0000313|EMBL:EDY18802.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
conserved hypothetical protein
13_1_20cm_4_scaffold_16061_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15996..17192)
DNA (1197bp) protein (399aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H2_9BACT
von Willebrand factor type A {ECO:0000313|EMBL:EDY18802.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_16061_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17254..18045)
DNA (792bp) protein (264aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H1_9BACT
von Willebrand factor type A {ECO:0000313|EMBL:EDY18801.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Mg-chelatase subunit ChlD
Displaying 19 items

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