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13_1_20cm_4_scaffold_175

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_175_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(90..617)
DNA (528bp) protein (176aa)
L-asparaginase n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UDJ0_9RHOB
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:CDM65737.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_4_scaffold_175_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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648..3029
DNA (2382bp) protein (794aa)
Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D845_9BACT
Type II and III secretion system protein {ECO:0000313|EMBL:EDY17399.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gspD; general secretion pathway protein D
13_1_20cm_4_scaffold_175_3
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3043..3450
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:EYD76045.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
13_1_20cm_4_scaffold_175_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3609..5348
DNA (1740bp) protein (580aa)
Type II secretion system protein E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT
Type II secretion system protein E {ECO:0000313|EMBL:EDY17406.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type II secretion system protein E (GspE)
13_1_20cm_4_scaffold_175_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5400..6047)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="
Ribulose-phosphate 3-epimerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD9_9BACT
rpeA; ribulose-phosphate 3-epimerase
13_1_20cm_4_scaffold_175_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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6285..7322
DNA (1038bp) protein (346aa)
rod shape-determining protein Mbl n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B3C
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=GWF2_Lentisphaerae_57_35_curated
mreB; rod shape-determining protein MreB
13_1_20cm_4_scaffold_175_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7428..8231
DNA (804bp) protein (268aa)
Cell shape-determining protein MreC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U1_9BACT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniob
rod shape-determining protein MreC
13_1_20cm_4_scaffold_175_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8228..8770
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18545.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_175_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8767..11043
DNA (2277bp) protein (759aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter f
Penicillin-binding protein 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U3_9BACT
ftsI; Cell division protein FtsI
13_1_20cm_4_scaffold_175_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11116..12690
DNA (1575bp) protein (525aa)
Ribonuclease, Rne/Rng family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U4_9BACT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EDY18547.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribonuclease, Rne/Rng family
13_1_20cm_4_scaffold_175_11
unknown

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12849..13532
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_20cm_4_scaffold_175_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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13589..14764
DNA (1176bp) protein (392aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW4_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDY21284.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH
13_1_20cm_4_scaffold_175_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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14761..14961
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDY21283.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_175_14
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(14986..16386)
DNA (1401bp) protein (467aa)
nfeD; membrane-bound serine protease, NfeD family; K07403 membrane-bound serine protease (ClpP class) Tax=GWF2_Lentisphaerae_57_35_curated
Membrane-bound serine protease, NfeD family id=3793111 bin=GWF2_Lentisphaerae_57_35 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
nfeD; membrane-bound serine protease, NfeD family
13_1_20cm_4_scaffold_175_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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16464..18290
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=497964 species="Bacteria; Verrucomicro
DNA primase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT
DNA primase
Displaying 15 items

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