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13_1_20cm_4_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_225_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_20cm_4_scaffold_225_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

213..1319
DNA (1107bp) protein (369aa)
DNA repair photolyase Tax=CSP1_5_NC10
DNA repair photolyase id=14429675 bin=bin3_NC10 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin3_NC10 organism_group=NC10
DNA repair photolyase
13_1_20cm_4_scaffold_225_3
RLO_PLX_64_10, Bacteria

Not on your lists

1788..2153
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E3414
hypothetical protein; K06897 Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_4_scaffold_225_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2200..2559
DNA (360bp) protein (120aa)
Beta-lactamase domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTH9_HYPDA
Beta-lactamase domain protein {ECO:0000313|EMBL:ADJ22541.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" s
beta-lactamase
13_1_20cm_4_scaffold_225_5
unknown

Not on your lists

2738..3235
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_4_scaffold_225_6
unknown

Not on your lists

comp(3418..3630)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_4_scaffold_225_trna_3
unknown

Not on your lists

comp(3785..3856)
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_225_7

Not on your lists

comp(3913..4488)
DNA (576bp) protein (192aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48586.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_225_trna_1
unknown

Not on your lists

4567..4640
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_225_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4653..7433)
DNA (2781bp) protein (927aa)
Methionine synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLZ0_THISH
Methionine synthase {ECO:0000313|EMBL:ACL71743.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibr
metH; B12-dependent methionine synthase
13_1_20cm_4_scaffold_225_9

Not on your lists

comp(7430..8530)
DNA (1101bp) protein (367aa)
Methionine synthase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UNQ8_AKKM8
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48588.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methionine synthase
13_1_20cm_4_scaffold_225_10

Not on your lists

9655..9936
DNA (282bp) protein (94aa)
Putative metabolite transport protein YjhB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XE32_RHIFR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
yjhB; metabolite transport protein YjhB
13_1_20cm_4_scaffold_225_11

Not on your lists

comp(9933..10667)
DNA (735bp) protein (245aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48591.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lytC; N-acetylmuramoyl-L-alanine amidase
13_1_20cm_4_scaffold_225_12

Not on your lists

10822..12096
DNA (1275bp) protein (425aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48592.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysaccharide deacetylase
13_1_20cm_4_scaffold_225_13

Not on your lists


12119..13612
DNA (1494bp) protein (498aa)
Signal recognition particle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X7_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured
signal recognition particle protein
13_1_20cm_4_scaffold_225_14

Not on your lists


13614..13946
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S16
13_1_20cm_4_scaffold_225_15

Not on your lists

14129..14359
DNA (231bp) protein (77aa)
UPF0109 protein CfE428DRAFT_2913 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48595.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_225_16

Not on your lists

14484..15092
DNA (609bp) protein (203aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG7_9BACT
13_1_20cm_4_scaffold_225_17

Not on your lists

comp(15237..16484)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured b
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC3_9BACT
13_1_20cm_4_scaffold_225_18

Not on your lists

comp(16481..16936)
DNA (456bp) protein (152aa)
Cyclase/dehydrase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cyclase/dehydrase
13_1_20cm_4_scaffold_225_19

Not on your lists

comp(17229..18416)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKL0_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_225_trna_2
unknown

Not on your lists

comp(18558..18630)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_225_20
unknown

Not on your lists

comp(18840..19070)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_225_21

Not on your lists

19159..19845
DNA (687bp) protein (229aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBJ5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_225_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19919..21001
DNA (1083bp) protein (361aa)
Bicupin, oxalate decarboxylase/oxidase n=1 Tax=Schlesneria paludicola RepID=UPI00029A874D rbh
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:AGA31505.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sing
oxalate decarboxylase family bicupin
13_1_20cm_4_scaffold_225_23

Not on your lists

21115..22803
DNA (1689bp) protein (563aa)
glutamate formiminotransferase (EC:2.1.2.5)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutamate formiminotransferase id=1883924 bin=GWE2_Bacteroidetes_32_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
13_1_20cm_4_scaffold_225_24

Not on your lists

22962..24197
DNA (1236bp) protein (412aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HUTI_SOLUE
13_1_20cm_4_scaffold_225_25

Not on your lists

24219..24368
DNA (150bp) protein (50aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_225_26
unknown

Not on your lists

24541..24660
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_4_scaffold_225_27

Not on your lists

24657..25994
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=77133 spec
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT rbh
trigger factor
Displaying items 1-30 of 31 in total

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