ggKbase home page

13_1_20cm_4_scaffold_241

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_241_1
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3..1106)
DNA (1104bp) protein (368aa)
Beta-lactamase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HV34_CYAP4
Beta-lactamase {ECO:0000313|EMBL:ACL43081.1}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7
beta-lactamase
13_1_20cm_4_scaffold_241_2

Not on your lists

comp(1179..1604)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6H8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIA12737.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_241_3
unknown

Not on your lists

comp(2138..2551)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_4_scaffold_241_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2827..4122
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D047_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20361.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_241_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4262..4708
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22222.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_241_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4799..7393
DNA (2595bp) protein (865aa)
Peptidase M16 domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI5_9BACT rbh
Peptidase M16 domain protein {ECO:0000313|EMBL:EDY22223.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase M16 domain-containing protein
13_1_20cm_4_scaffold_241_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7397..7840
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5S2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18125.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_241_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8155..9177)
DNA (1023bp) protein (341aa)
Mammalian cell entry related domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2R0_9BACT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EDY19500.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_241_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9158..9928)
DNA (771bp) protein (257aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Q9_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY19499.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ABC transporter-like protein
13_1_20cm_4_scaffold_241_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9943..10767)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Q8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19498.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_241_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10941..12029
DNA (1089bp) protein (363aa)
Peptidase T2 asparaginase 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT33_CHIPD
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:ACU59072.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sou
peptidase T2 asparaginase 2
13_1_20cm_4_scaffold_241_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12207..12920
DNA (714bp) protein (238aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDM1_CHLTF
Glycosyl transferase {ECO:0000313|EMBL:CDM66917.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell wall biosynthesis glycosyltransferase
13_1_20cm_4_scaffold_241_13
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13148..16570
DNA (3423bp) protein (1141aa)
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/H box helicase domain protein {ECO:0000313|EMBL:BAK77559.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Ps
DEAD/DEAH box helicase
13_1_20cm_4_scaffold_241_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16717..17565
DNA (849bp) protein (283aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000381915D
DEAD/DEAH box helicase
13_1_20cm_4_scaffold_241_15
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(17666..18028)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DXL7_METI4
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
hypothetical protein
13_1_20cm_4_scaffold_241_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18160..19377)
DNA (1218bp) protein (406aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
carbamoyl phosphate synthase small subunit n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745591
13_1_20cm_4_scaffold_241_17
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19734..22067)
DNA (2334bp) protein (778aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase, beta subunit n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017448F3 rbh
13_1_20cm_4_scaffold_241_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(22064..22615)
DNA (552bp) protein (184aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D691_9BACT
phenylalanyl-tRNA synthetase subunit alpha
Displaying 18 items

View Taxonomy