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13_1_20cm_4_scaffold_3320

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3320_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1..564)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E41
3D domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
3D domain-containing protein
13_1_20cm_4_scaffold_3320_2
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

623..1939
DNA (1317bp) protein (439aa)
glycine C-acetyltransferase; K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=CG_Ignavi_02
Glycine C-acetyltransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN86_IGNAJ rbh
glycine C-acetyltransferase
13_1_20cm_4_scaffold_3320_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1945..2145
DNA (201bp) protein (67aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_20cm_4_scaffold_3320_4
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2227..2463)
DNA (237bp) protein (79aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPV6_ROSCS
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ABU59602.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source=
cupin
13_1_20cm_4_scaffold_3320_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2582..3778)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ37_IGNAJ rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH48994.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteriu
hypothetical protein
13_1_20cm_4_scaffold_3320_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3967..4986)
DNA (1020bp) protein (340aa)
Aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZM3_SOLUE
Aminopeptidase {ECO:0000313|EMBL:ABJ84892.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain
aminopeptidase
13_1_20cm_4_scaffold_3320_7
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5035..5646)
DNA (612bp) protein (204aa)
Integral membrane protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZS9_SOLUE
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_18_curated
hypothetical protein
13_1_20cm_4_scaffold_3320_8
unknown

Not on your lists

comp(5864..6319)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_4_scaffold_3320_9

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comp(6319..6963)
DNA (645bp) protein (215aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48589.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_3320_10
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7102..7572)
DNA (471bp) protein (157aa)
Putative periplasmic protein n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5ZBU6_9ENTR
Periplasmic protein {ECO:0000313|EMBL:KGT92253.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
hypothetical protein
13_1_20cm_4_scaffold_3320_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8101..8817
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GNA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55383.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
13_1_20cm_4_scaffold_3320_12
unknown

Not on your lists

comp(8695..8943)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_4_scaffold_3320_13
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8973..9356
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBE1_9BACT
Two-component response regulator {ECO:0000313|EMBL:KHE93126.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;"
response regulator receiver protein
13_1_20cm_4_scaffold_3320_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9437..9817)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D124_9BACT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycine cleavage system H protein
13_1_20cm_4_scaffold_3320_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9814..10917)
DNA (1104bp) protein (368aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoni
Aminomethyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D125_9BACT
glycine cleavage system T protein
13_1_20cm_4_scaffold_3320_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11129..11929
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D126_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20038.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_3320_17
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12022..13026
DNA (1005bp) protein (335aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T4F2_BURSG
Displaying 17 items

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