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13_1_20cm_4_scaffold_344

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_344_1
unknown

Not on your lists

3..602
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_4_scaffold_344_2
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(654..1433)
DNA (780bp) protein (260aa)
Sulfotransferase domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QJM3_9CYAN
Sulfotransferase domain protein {ECO:0000313|EMBL:ERT08169.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
Stf0 sulfotransferase
13_1_20cm_4_scaffold_344_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1534..2757)
DNA (1224bp) protein (408aa)
Catalytic domain of component of various dehydrogenase complexes n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ8_9BACT rbh
Catalytic domain of component of various dehydrogenase complexes {ECO:0000313|EMBL:EEF57369.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia s
catalytic domain of components of various dehydrogenase complexes
13_1_20cm_4_scaffold_344_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2763..3731)
DNA (969bp) protein (323aa)
Transketolase central region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ9_9BACT
Transketolase central region {ECO:0000313|EMBL:EEF57370.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
transketolase
13_1_20cm_4_scaffold_344_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3728..4756)
DNA (1029bp) protein (343aa)
Dehydrogenase E1 component n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC32_9BACT rbh
Dehydrogenase E1 component {ECO:0000313|EMBL:EDY16006.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dehydrogenase E1 component
13_1_20cm_4_scaffold_344_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4884..8594)
DNA (3711bp) protein (1237aa)
Chromosome partition protein Smc n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D705_9BACT rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chromosome segregation protein SMC
13_1_20cm_4_scaffold_344_7
unknown

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comp(8623..8907)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_4_scaffold_344_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8984..10318
DNA (1335bp) protein (445aa)
Amino acid permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A775_GEMAT
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid permease
13_1_20cm_4_scaffold_344_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10350..11684
DNA (1335bp) protein (445aa)
Peptidase M20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU47_9BACT rbh
Peptidase M20 {ECO:0000313|EMBL:EDY22085.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase M20
13_1_20cm_4_scaffold_344_10
unknown

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comp(11705..12253)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_4_scaffold_344_11
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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12387..12812
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003666012
Cell wall-associated hydrolase {ECO:0000313|EMBL:ACD82595.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilu
spr; Cell wall-associated hydrolase
13_1_20cm_4_scaffold_344_12
unknown

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12894..13085
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_4_scaffold_344_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13176..13859)
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8R7_AZOL4
queC; Queuosine biosynthesis protein
13_1_20cm_4_scaffold_344_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14016..14231)
DNA (216bp) protein (72aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1V6_9BACT
7-cyano-7-deazaguanine reductase
13_1_20cm_4_scaffold_344_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14572..14940
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21309.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_344_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14959..16299)
DNA (1341bp) protein (447aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU93_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EDY22131.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoni
sigma-54 factor interaction domain-containing protein
13_1_20cm_4_scaffold_344_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16316..17038)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU92_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22130.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_344_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17062..18660)
DNA (1599bp) protein (533aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU91_9BACT
13_1_20cm_4_scaffold_344_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18857..20023
DNA (1167bp) protein (389aa)
DltD central domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J3_9BACT
DltD central domain protein {ECO:0000313|EMBL:EDY19855.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
alanine transporter
13_1_20cm_4_scaffold_344_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20155..21345
DNA (1191bp) protein (397aa)
DltD central domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J3_9BACT
DltD central domain protein {ECO:0000313|EMBL:EDY19855.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
D-alanyl-lipoteichoic acid biosynthesis protein DltD
13_1_20cm_4_scaffold_344_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21346..21663
DNA (318bp) protein (106aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; TaxID=49
dltC; D-alanyl carrier protein (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J2_9BACT
13_1_20cm_4_scaffold_344_22
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

21798..23255
DNA (1458bp) protein (486aa)
D-alanine--poly(phosphoribitol) ligase subunit 1; K03367 D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] Tax=CG_Anaero_03
dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.3.2.-)
Amino acid adenylation domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J0_9BACT
13_1_20cm_4_scaffold_344_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23252..24730
DNA (1479bp) protein (493aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I9_9BACT rbh
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:EDY19851.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus E
D-alanyl-lipoteichoic acid biosynthesis protein DltB
13_1_20cm_4_scaffold_344_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24838..27132)
DNA (2295bp) protein (765aa)
Peptidase S9, prolyl oligopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUF5_KORVE
Peptidase S9, prolyl oligopeptidase {ECO:0000313|EMBL:ABF39495.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
peptidase S9, prolyl oligopeptidase
13_1_20cm_4_scaffold_344_25

Not on your lists

comp(27113..28075)
DNA (963bp) protein (321aa)
isocitrate dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A826
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AIA12772.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADP-dependent isocitrate dehydrogenase
Displaying 25 items

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