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13_1_20cm_4_scaffold_3581

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3581_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(264..1604)
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWF2_Lentisphaerae_57_35_curated
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase id=4349096 bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
13_1_20cm_4_scaffold_3581_trna_1
unknown

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comp(1749..1820)
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_3581_2

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1942..2394
DNA (453bp) protein (151aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNF9_SINAD
Marine sediment metagenome DNA, contig: S01H1_L05764 {ECO:0000313|EMBL:GAF67559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
redox protein, regulator of disulfide bond formation
13_1_20cm_4_scaffold_3581_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2473..3834
DNA (1362bp) protein (454aa)
grs1; glycyl-tRNA synthetase (class II); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
glycine-tRNA synthetase subunit beta n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D1496
grs1; glycyl-tRNA synthetase (class II)
13_1_20cm_4_scaffold_3581_4
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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3834..4226
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2D6_OWEHD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
13_1_20cm_4_scaffold_3581_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4162..4965)
DNA (804bp) protein (268aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=3937090 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_3581_6
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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5077..6285
DNA (1209bp) protein (403aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037B7941
Suspect SCG annotation. See neighboring gene [13_1_20cm_4_scaffold_3581_7].
valS; Valyl-tRNA synthetase
13_1_20cm_4_scaffold_3581_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6359..7612
DNA (1254bp) protein (418aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
valyl-tRNA synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017462CE
valyl-tRNA synthetase
13_1_20cm_4_scaffold_3581_8
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7563..8318)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
Uncharacterized protein {ECO:0000313|EMBL:KEZ77878.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
13_1_20cm_4_scaffold_3581_9
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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8364..9269
DNA (906bp) protein (302aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=GWF2_Lentisphaerae_52_8_curated
Carbon starvation protein CstA id=4490703 bin=GWF2_Lentisphaerae_52_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
carbon starvation protein CstA
13_1_20cm_4_scaffold_3581_10
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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9293..10075
DNA (783bp) protein (261aa)
Carbon starvation protein CstA n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS08_OPITP
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
carbon starvation protein CstA
Displaying 11 items

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