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13_1_20cm_4_scaffold_442

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_442_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..221)
DNA (219bp) protein (73aa)
Acyl carrier protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Y9_9BACT
Acyl carrier protein {ECO:0000313|EMBL:EDY17034.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acyl carrier protein
13_1_20cm_4_scaffold_442_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(351..674)
DNA (324bp) protein (108aa)
Sec-independent protein translocase protein TatA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Y8_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ell
twin-arginine translocation protein, TatA/E family subunit
13_1_20cm_4_scaffold_442_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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792..1652
DNA (861bp) protein (287aa)
DNA repair protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E06
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
Ku domain-containing protein
13_1_20cm_4_scaffold_442_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1713..1982
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E3
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
30S ribosomal protein S14
13_1_20cm_4_scaffold_442_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2057..3457
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E1 rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_4_scaffold_442_6
RLO_PLX_64_10, Bacteria

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comp(3460..3873)
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=unclassified Opitutaceae RepID=H1J002_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
glyoxalase
13_1_20cm_4_scaffold_442_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3881..4318)
DNA (438bp) protein (146aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL8_9BACT
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:EDY21892.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;
transcriptional regulator
13_1_20cm_4_scaffold_442_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4479..5882
DNA (1404bp) protein (468aa)
Divalent metal cation transporter MntH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL7_9BACT
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Manganese transport protein mntH
13_1_20cm_4_scaffold_442_9
unknown

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5898..6101
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_4_scaffold_442_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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6094..6519
DNA (426bp) protein (142aa)
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UspA domain-containing protein
UspA domain protein id=4622027 bin=GWC2_OP3-like_45_7 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
13_1_20cm_4_scaffold_442_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6671..7909
DNA (1239bp) protein (413aa)
Glycogen synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVZ8_9BACT rbh
Glycogen synthase {ECO:0000313|EMBL:EDY21590.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
predicted glycogen synthase, ADP-glucose transglucosylase
13_1_20cm_4_scaffold_442_12
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7945..8820)
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=Q5GZ87_XANOR
Uncharacterized protein {ECO:0000313|EMBL:AJQ87370.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae
hypothetical protein
13_1_20cm_4_scaffold_442_13
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8845..9651)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NUF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGM78413.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;
GumN family protein
13_1_20cm_4_scaffold_442_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9894..11090
DNA (1197bp) protein (399aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXU6_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY21094.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
amiC; N-acetylmuramoyl-L-alanine amidase
13_1_20cm_4_scaffold_442_15
unknown

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11098..11664
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_20cm_4_scaffold_442_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12028..13197
DNA (1170bp) protein (390aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU5_9BACT
thiamine biosynthesis protein ThiC
13_1_20cm_4_scaffold_442_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13155..13910
DNA (756bp) protein (252aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU5_9BACT
thiamine biosynthesis protein ThiC
13_1_20cm_4_scaffold_442_18
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13922..14140
DNA (219bp) protein (73aa)
Phosphomethylpyrimidine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D313_9BACT
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
13_1_20cm_4_scaffold_442_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(14258..15415)
DNA (1158bp) protein (386aa)
Peptidase M24 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X6_9BACT
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase M24
Displaying 19 items

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