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13_1_20cm_4_scaffold_4561

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4561_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3..461
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D868_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17422.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_4561_2
unknown

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458..1105
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1106..1516)
DNA (411bp) protein (137aa)
General secretion pathway protein G n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D870_9BACT
General secretion pathway protein G {ECO:0000313|EMBL:EDY17424.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gspG; general secretion pathway protein G
13_1_20cm_4_scaffold_4561_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1535..2605)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D871_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17425.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_4561_5
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(2626..3609)
DNA (984bp) protein (328aa)
Type II secretion system protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ7_9BACT
gspF; general secretory pathway component, cryptic Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
gspF; general secretory pathway component, cryptic
13_1_20cm_4_scaffold_4561_6
unknown

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comp(3672..3866)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_7
unknown

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4015..4434
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_8
unknown

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4790..4960
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_9
unknown

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5251..5523
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6040..8019
DNA (1980bp) protein (660aa)
response regulator receiver sensor signal transduction histidine kinase Tax=GWF2_Verrucomicrobia_62_7_curated
Response regulator receiver sensor signal transduction histidine kinase id=4324529 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative histidine kinase
13_1_20cm_4_scaffold_4561_11
unknown

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8019..8183
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_4561_12

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comp(8136..10100)
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B6BECD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49188.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_4561_13
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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10193..10987
DNA (795bp) protein (265aa)
RarD protein, DMT superfamily transporter n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBE7_DESDE
RarD protein, DMT superfamily transporter {ECO:0000313|EMBL:EGB14266.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;"
RarD protein, DMT superfamily transporter
13_1_20cm_4_scaffold_4561_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11177..11773
DNA (597bp) protein (199aa)
Peptide methionine sulfoxide reductase MsrA/MsrB {ECO:0000313|EMBL:EXY39638.1}; EC=1.8.4.12 {ECO:0000313|EMBL:EXY39638.1};; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
Methionine-R-sulfoxide reductase n=2 Tax=Bacteroides fragilis RepID=I9AVH9_BACFG
putative peptide methionine sulfoxide reductase
13_1_20cm_4_scaffold_4561_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11793..12413
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21633.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_4561_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12652..13332)
DNA (681bp) protein (227aa)
putative glycosyltransferase (EC:2.4.-.-)
Glycosyl transferase family 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D738_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EDY17689.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_4561_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13335..14222)
DNA (888bp) protein (296aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D740_9BACT
lipoyl synthase
Displaying 17 items

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