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13_1_20cm_4_scaffold_5719

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5719_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..413)
DNA (411bp) protein (137aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB0_9BACT
Outer membrane lipoprotein carrier protein LolA {ECO:0000313|EMBL:EDY21702.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobac
13_1_20cm_4_scaffold_5719_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(692..2803)
DNA (2112bp) protein (704aa)
Exporter of the RND superfamily protein-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWA7_9BACT rbh
Exporter of the RND superfamily protein-like protein {ECO:0000313|EMBL:EDY21699.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ell
hypothetical protein
13_1_20cm_4_scaffold_5719_3
unknown

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comp(2825..3232)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_4_scaffold_5719_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3234..4451)
DNA (1218bp) protein (406aa)
Monooxygenase FAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWA5_9BACT
Monooxygenase FAD-binding {ECO:0000313|EMBL:EDY21697.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_5719_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4642..5748
DNA (1107bp) protein (369aa)
Permease YjgP/YjgQ family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW87_9BACT rbh
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:EDY21679.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
permease
13_1_20cm_4_scaffold_5719_6
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5887..6291
DNA (405bp) protein (135aa)
Sensory transduction protein kinase (EC 2.7.3.-) {ECO:0000313|EMBL:CBW75313.1}; EC=2.7.3.- {ECO:0000313|EMBL:CBW75313.1};; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
sensory transduction protein kinase (EC:2.7.3.-)
Sensory transduction protein kinase (EC 2.7.3.-) n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5ART1_BURRH
13_1_20cm_4_scaffold_5719_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6303..7109)
DNA (807bp) protein (269aa)
Transglutaminase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AP8_RHOPB rbh
Transglutaminase-like {ECO:0000313|EMBL:ABD86538.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
transglutaminase-like protein
13_1_20cm_4_scaffold_5719_8
unknown

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comp(7103..7816)
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_20cm_4_scaffold_5719_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7900..8169
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E3
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
30S ribosomal protein S14
13_1_20cm_4_scaffold_5719_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8191..9615
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E1
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_4_scaffold_5719_11
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(9803..11776)
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0003737036 rbh
Sensor histidine kinase {ECO:0000313|EMBL:EKF01099.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
PAS domain-containing protein
13_1_20cm_4_scaffold_5719_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11951..12607
DNA (657bp) protein (219aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446FA
erfK; erfK/srfK family protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
erfK; erfK/srfK family protein
13_1_20cm_4_scaffold_5719_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12707..13762
DNA (1056bp) protein (352aa)
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4A7_9BACT
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
13_1_20cm_4_scaffold_5719_14

Not on your lists

13862..14371
DNA (510bp) protein (170aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49141.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_5719_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14578..15411
DNA (834bp) protein (278aa)
DNA repair protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E06
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
Ku domain-containing protein
13_1_20cm_4_scaffold_5719_16
unknown

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15564..15935
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_5719_17
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(15970..16332)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQC7_9BACT
hypothetical protein Tax=RBG_16_Chloroflexi_64_43_curated
hypothetical protein
13_1_20cm_4_scaffold_5719_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16381..16821)
DNA (441bp) protein (147aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRY1_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57392.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source
oxidoreductase domain-containing protein
Displaying 18 items

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