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13_1_20cm_4_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_68_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(46..1104)
DNA (1059bp) protein (353aa)
L-threonine synthase {ECO:0000313|EMBL:CDM65753.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDM65753.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrino
L-threonine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BL4_SOLUE
threonine synthase
13_1_20cm_4_scaffold_68_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1159..2304
DNA (1146bp) protein (382aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R3_9BACT
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EDY17121.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_68_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2748..3542)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYE8_OPITP
Uncharacterized protein {ECO:0000313|EMBL:ACB77046.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
hypothetical protein
13_1_20cm_4_scaffold_68_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3573..4409)
DNA (837bp) protein (279aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacte
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00037D0A55 rbh
DNA modification methylase
13_1_20cm_4_scaffold_68_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4600..5394
DNA (795bp) protein (265aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthonio
Thiazole synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG8_9BACT
thiG; thiazole synthase
13_1_20cm_4_scaffold_68_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5480..6076)
DNA (597bp) protein (199aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC77_9BACT
13_1_20cm_4_scaffold_68_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6073..6480)
DNA (408bp) protein (136aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC78_9BACT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EDY15955.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
exbD; biopolymer transport protein ExbD/TolR
13_1_20cm_4_scaffold_68_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6503..7225)
DNA (723bp) protein (241aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC79_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDY15956.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tolQ; MotA/TolQ/ExbB proton channel family protein
13_1_20cm_4_scaffold_68_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7225..8193)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC80_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_4_scaffold_68_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8297..9379)
DNA (1083bp) protein (361aa)
8-oxoguanine DNA glycosylase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D964_9BACT
8-oxoguanine DNA glycosylase domain protein {ECO:0000313|EMBL:EDY16967.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
13_1_20cm_4_scaffold_68_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9545..10498
DNA (954bp) protein (318aa)
SSS sodium solute transporter superfamily n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J3K0_9BACT
putP; Na+/proline symporter Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SSS sodium solute transporter superfamily protein
13_1_20cm_4_scaffold_68_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10447..11073
DNA (627bp) protein (209aa)
SSS sodium solute transporter superfamily n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DUY6_9BACT
putP; Na+/proline symporter Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SSS sodium solute transporter superfamily protein
13_1_20cm_4_scaffold_68_13
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11188..11514
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G7T5_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58675.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
hypothetical protein
13_1_20cm_4_scaffold_68_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..11777
DNA (267bp) protein (89aa)
Uncharacterized protein n=6 Tax=Crocosphaera watsonii RepID=G5JCY6_CROWT
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_20cm_4_scaffold_68_15
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11926..12246
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Rhodothermus marinus RepID=D0MG33_RHOM4
fdxA; ferredoxin; K05524 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
4Fe-4S ferredoxin
13_1_20cm_4_scaffold_68_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(12287..14116)
DNA (1830bp) protein (610aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
aspartyl-tRNA synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468E8 rbh
aspartyl-tRNA synthetase
13_1_20cm_4_scaffold_68_17
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists


comp(14147..15301)
DNA (1155bp) protein (385aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales
Histidyl-tRNA synthetase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DX00_METI4
hisS; Histidyl-tRNA synthetase
13_1_20cm_4_scaffold_68_18
unknown

Not on your lists

15465..15896
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_4_scaffold_68_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16092..17762
DNA (1671bp) protein (557aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU00_9BACT
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
excinuclease ABC subunit C
13_1_20cm_4_scaffold_68_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17886..19811
DNA (1926bp) protein (642aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EDY17641.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY17641.1};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthon
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M4_9BACT rbh
13_1_20cm_4_scaffold_68_21
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19949..20989)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035DA275 rbh
tas; oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
tas; oxidoreductase
13_1_20cm_4_scaffold_68_22
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20986..22410)
DNA (1425bp) protein (475aa)
Putative membrane protein n=1 Tax=Leptospira sp. B5-022 RepID=M6DAY7_9LEPT
Putative membrane protein {ECO:0000313|EMBL:EMK01348.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
hypothetical protein
13_1_20cm_4_scaffold_68_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22581..23342
DNA (762bp) protein (254aa)
chelatase (EC:4.99.1.3)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z3_9BACT rbh
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EDY20005.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
13_1_20cm_4_scaffold_68_24
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23390..23569)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ17238.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.
13_1_20cm_4_scaffold_68_25
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23616..24008)
DNA (393bp) protein (131aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RFE9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AJT62717.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein
13_1_20cm_4_scaffold_68_26
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24026..24595)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE86_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:AJT62717.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein
13_1_20cm_4_scaffold_68_27
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

24707..25168
DNA (462bp) protein (154aa)
Putative GAF sensor protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHP1_THET1
GAF domain-containing protein; K07170 GAF domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
GAF sensor protein
13_1_20cm_4_scaffold_68_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25199..25876
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20006.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Hypothetical Protein
13_1_20cm_4_scaffold_68_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25873..27180
DNA (1308bp) protein (436aa)
Amidohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z5_9BACT
Amidohydrolase {ECO:0000313|EMBL:EDY20007.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ssnA; Cytosine deaminase or related metal-dependent hydrolase
13_1_20cm_4_scaffold_68_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27258..28688
DNA (1431bp) protein (477aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D101_9BACT
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:EDY20013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase subunit sigma-54
Displaying items 1-30 of 53 in total

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