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13_1_20cm_4_scaffold_726

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_726_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

171..722
DNA (552bp) protein (184aa)
FeS assembly SUF system protein SufT n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU96_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EDY22134.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_726_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


924..1526
DNA (603bp) protein (201aa)
50S ribosomal protein L9 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC29_9BACT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
50S ribosomal protein L9
13_1_20cm_4_scaffold_726_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1527..3017
DNA (1491bp) protein (497aa)
Replicative DNA helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC28_9BACT rbh
Replicative DNA helicase {ECO:0000313|EMBL:EDY16002.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
replicative DNA helicase
13_1_20cm_4_scaffold_726_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3163..5157)
DNA (1995bp) protein (665aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opit
Transketolase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI2_OPITP rbh
transketolase
13_1_20cm_4_scaffold_726_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5304..6383
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20801.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_726_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


6489..7847
DNA (1359bp) protein (453aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU73_9BACT
dimethyladenosine transferase
13_1_20cm_4_scaffold_726_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8109..8885)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20003.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_726_8
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9006..9950
DNA (945bp) protein (315aa)
Histidine kinase {ECO:0000313|EMBL:EXU63338.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
13_1_20cm_4_scaffold_726_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10027..11283)
DNA (1257bp) protein (419aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9R9_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDY16850.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MFS transporter
13_1_20cm_4_scaffold_726_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11476..13665
DNA (2190bp) protein (730aa)
AMP-dependent synthetase and ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9R6_9BACT rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EDY16847.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
AMP-dependent synthetase
13_1_20cm_4_scaffold_726_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13733..14650)
DNA (918bp) protein (306aa)
Epoxide hydrolase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUT8_GRABC
Uncharacterized protein {ECO:0000313|EMBL:AHX16333.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
hypothetical protein
13_1_20cm_4_scaffold_726_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14665..15699)
DNA (1035bp) protein (345aa)
conserved hypothetical protein, membrane n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE8F
conserved exported protein of unknown function Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_20cm_4_scaffold_726_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15891..16829
DNA (939bp) protein (313aa)
Predicted NADPH:quinone reductase (Alcohol dehydrogenase superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1R4_UNCMA
Putative NADPH:quinone reductase (Alcohol dehydrogenase superfamily) {ECO:0000313|EMBL:EYF08305.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Po
NADPH:quinone reductase
13_1_20cm_4_scaffold_726_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16862..17158
DNA (297bp) protein (99aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98886.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_20cm_4_scaffold_726_15
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17266..17538)
DNA (273bp) protein (91aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G407_CHLAD
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACL25409.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" sour
cupin
13_1_20cm_4_scaffold_726_16
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

17755..18438
DNA (684bp) protein (228aa)
hypothetical protein Tax=GWA2_WOR_2_47_8_curated
hypothetical protein id=14426586 bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_20cm_4_scaffold_726_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18547..18912)
DNA (366bp) protein (122aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BI9_SOLUE
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ81577.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_726_18
unknown

Not on your lists

comp(19080..19298)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_4_scaffold_726_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19381..20787)
DNA (1407bp) protein (469aa)
Hydrolase, alpha/beta hydrolase fold having protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIS1_9DELT
alpha/beta fold family hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
yuaR1; alpha/beta fold family hydrolase
13_1_20cm_4_scaffold_726_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20796..21575)
DNA (780bp) protein (260aa)
dihydrodipicolinate synthetase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Dihydrodipicolinate synthetase id=4141953 bin=GWA2_Methylomirabilis_73_35 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydrodipicolinate synthetase
13_1_20cm_4_scaffold_726_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21642..22268
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUQ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22295.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_726_22
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22293..22955)
DNA (663bp) protein (221aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-) Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
HAD family hydrolase id=14426776 bin=bin1_lowGC species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
HAD-superfamily hydrolase
13_1_20cm_4_scaffold_726_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23157..26402
DNA (3246bp) protein (1082aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR74_KORVE rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF40626.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_4_scaffold_726_24
unknown

Not on your lists

comp(26473..26760)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_726_25
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(26961..27551)
DNA (591bp) protein (197aa)
msrB; peptide methionine sulfoxide reductase MsrB; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Peptide-methionine (S)-S-oxide reductase n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UR75_9BACE
bifunctional methionine sulfoxide reductase A/B
13_1_20cm_4_scaffold_726_26
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(27720..29273)
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8N9S2_9DEIN rbh
Uncharacterized protein {ECO:0000313|EMBL:CBE67527.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_4_scaffold_726_27
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29369..29914
DNA (546bp) protein (182aa)
Acetyltransferase, GNAT family n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BJW7_TERTT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ACR13164.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacte
acetyltransferase, GNAT family
13_1_20cm_4_scaffold_726_28
unknown

Not on your lists

comp(30016..30384)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_4_scaffold_726_29
unknown

Not on your lists

30645..30962
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_4_scaffold_726_30
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

31049..31471
DNA (423bp) protein (141aa)
putative transmembrane protein Tax=GWC2_Nitrospirae_56_14_curated
Putative membrane-associated protein id=4524196 bin=GWC2_Nitrospirae-rel_56_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
conserved membrane hypothetical protein
Displaying 30 items

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