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13_1_20cm_4_scaffold_287_20

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(22327..22863)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 178.0
  • Bit_score: 188
  • Evalue 7.70e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF59845.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 178.0
  • Bit_score: 186
  • Evalue 3.10e-44
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 176.0
  • Bit_score: 169
  • Evalue 1.00e-39

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 537
GTGGAGCTGACCGATGCAGACCTCGTCGCGCGAGTTCTTGTCGATGAGGACCAGCACGCTTTCGGCGAACTGGTTCGGCGGCATCAATCCAGTGTGCGTGGTTTACTACGCCAGCTTACCCGCACCGACGTCGCTCTCGCCGACGATCTGGCCCAGCAAGCTTTCCTGCGCGCCTACAAGAACATCCGGAATTTTCGCGGCGAAGCGCGCTTTTCCACATGGCTTTATCGGATCGCCTATAATTGTTTTCGAGAAGATGCGCGCCGCCGGAAGGAACTCGTGGGAATCGATGAAGAACAACTCCAAACCCAACACGATCCTCAGGCTGCCGATCCTGGTTTAAGACATGACCTTATGCGGGCACTAAATCTACTTCCCTTGAATGAACGCTCCGCGATTTTACTTTGTTGCCAGAACGGTCTTTCCCACGATGAAGCTGCTCGTGTTCTCGACATCCCTCTTGGTACAGTGAAAACGAATGTCCTTAGAGGCCGCGAGAAATTGAAACGAATGCTTGCCGACTGGGGTCCAAATTAG
PROTEIN sequence
Length: 179
VELTDADLVARVLVDEDQHAFGELVRRHQSSVRGLLRQLTRTDVALADDLAQQAFLRAYKNIRNFRGEARFSTWLYRIAYNCFREDARRRKELVGIDEEQLQTQHDPQAADPGLRHDLMRALNLLPLNERSAILLCCQNGLSHDEAARVLDIPLGTVKTNVLRGREKLKRMLADWGPN*