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13_1_20cm_4_scaffold_287

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_287_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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173..937
DNA (765bp) protein (255aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDZ1_9DELT
Exodeoxyribonuclease III {ECO:0000313|EMBL:EPX62575.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
13_1_20cm_4_scaffold_287_2

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1109..3028
DNA (1920bp) protein (640aa)
Lipase maturation factor {ECO:0000313|EMBL:AIA16675.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP rbh
hypothetical protein
13_1_20cm_4_scaffold_287_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3535..3858
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D008_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20322.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_287_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3876..4307
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D007_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20321.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_287_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4265..4651
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:EDY20320.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_287_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4865..5722
DNA (858bp) protein (286aa)
Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D005_9BACT
Twitching motility protein {ECO:0000313|EMBL:EDY20319.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
twitching motility protein
13_1_20cm_4_scaffold_287_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5822..6988
DNA (1167bp) protein (389aa)
Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D003_9BACT
Twitching motility protein {ECO:0000313|EMBL:EDY20317.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
twitching motility protein
13_1_20cm_4_scaffold_287_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7211..8260)
DNA (1050bp) protein (350aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBA9_9BACT
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EDY16297.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin4
alcohol dehydrogenase
13_1_20cm_4_scaffold_287_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8352..11717)
DNA (3366bp) protein (1122aa)
Cation/multidrug efflux pump n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2F7_DESTA
cation/multidrug efflux pump Tax=RBG_16_Anaeromyxobacter_69_14_curated
cation/multidrug efflux pump
13_1_20cm_4_scaffold_287_10
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11719..12921)
DNA (1203bp) protein (401aa)
RND family efflux transporter, MFP subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2F6_DESTA
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AFM23747.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; De
RND family efflux transporter, MFP subunit
13_1_20cm_4_scaffold_287_11
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12918..13403)
DNA (486bp) protein (162aa)
Transcriptional regulator SlyA {ECO:0000313|EMBL:KFZ90916.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
Transcriptional regulator slyA id=2185090 bin=GWE2_Gammaproteobacteria_42_36 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
slyA; transcriptional regulator, MarR family
13_1_20cm_4_scaffold_287_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13490..14917)
DNA (1428bp) protein (476aa)
4-amino-4-deoxy-L-arabinose transferase/PMT family glycosyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744955
glycosyl transferase family 39 Tax=GWF2_Lentisphaerae_49_21_curated
glycosyl transferase 39
13_1_20cm_4_scaffold_287_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15077..16186
DNA (1110bp) protein (370aa)
NusA antitermination factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ1_9BACT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flav
nusA; transcription elongation factor
13_1_20cm_4_scaffold_287_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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16297..18525
DNA (2229bp) protein (743aa)
Translation initiation factor IF-2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ2_9BACT rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
infB; translation initiation factor 2, GTPase
13_1_20cm_4_scaffold_287_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18637..18987
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
ribosome-binding factor A
13_1_20cm_4_scaffold_287_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19103..20107
DNA (1005bp) protein (335aa)
Phosphoesterase RecJ domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ4_9BACT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:EDY20595.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoesterase RecJ domain-containing protein
13_1_20cm_4_scaffold_287_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20153..20875
DNA (723bp) protein (241aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ5_9BACT
tRNA pseudouridine synthase B
13_1_20cm_4_scaffold_287_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21013..21945
DNA (933bp) protein (311aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=320771 species="Bacteria; Verrucomicro
FMN adenylyltransferase / riboflavin kinase (EC:2.7.1.26 2.7.7.2)
riboflavin biosynthesis protein RibF n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B5F
13_1_20cm_4_scaffold_287_19
unknown

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comp(21975..22307)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_4_scaffold_287_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(22327..22863)
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK22_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF59845.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_4_scaffold_287_21
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22873..23487)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZJV0_9BACE
Uncharacterized protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
13_1_20cm_4_scaffold_287_trna_1
unknown

Not on your lists

23614..23685
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_287_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23745..24710
DNA (966bp) protein (322aa)
Ribosomal L11 methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0L0_9BACT
Ribosomal L11 methyltransferase {ECO:0000313|EMBL:EDY19872.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribosomal L11 methyltransferase
13_1_20cm_4_scaffold_287_23
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

24834..25910
DNA (1077bp) protein (359aa)
Nucleoside diphosphate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0L1_9BACT
ndk; nucleoside diphosphate kinase Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
nucleoside diphosphate kinase
13_1_20cm_4_scaffold_287_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25954..27117
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0L2_9BACT
Aminotransferase class I and II {ECO:0000313|EMBL:EDY19874.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
class I and II aminotransferase
13_1_20cm_4_scaffold_287_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27291..28931
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0R2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19924.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucosyl hydrolase family protein
13_1_20cm_4_scaffold_287_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

29045..29797
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0R1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19923.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_287_27
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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30030..32042
DNA (2013bp) protein (671aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristo
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C38
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
13_1_20cm_4_scaffold_287_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(32071..32793)
DNA (723bp) protein (241aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0N8_9BACT rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:EDY19900.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
phnP; Metal-dependent hydrolase of the beta-lactamase superfamily
13_1_20cm_4_scaffold_287_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

32924..34591
DNA (1668bp) protein (556aa)
DNA repair protein RecN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0N9_9BACT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sou
DNA repair protein RecN
Displaying items 1-30 of 57 in total

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