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13_1_20cm_4_scaffold_1305

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1305_1
unknown

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_4_scaffold_1305_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(353..1099)
DNA (747bp) protein (249aa)
Condensin subunit ScpB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF6_SOLUE
condensin subunit ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
condensin subunit ScpB
13_1_20cm_4_scaffold_1305_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1220..2056)
DNA (837bp) protein (279aa)
Condensin subunit ScpA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF7_SOLUE
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
condensin subunit ScpA
13_1_20cm_4_scaffold_1305_4
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2090..3385)
DNA (1296bp) protein (432aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AAR3_ALKEH
13_1_20cm_4_scaffold_1305_5
unknown

Not on your lists

comp(3369..3848)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_4_scaffold_1305_6
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(3925..5097)
DNA (1173bp) protein (391aa)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2) Tax=CG_Deferri_01
Butyryl-CoA dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SL73_9ZZZZ
acyl-CoA dehydrogenase
13_1_20cm_4_scaffold_1305_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5283..5531)
DNA (249bp) protein (83aa)
AbrB family transcriptional regulator {ECO:0000313|EMBL:KIJ77732.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB5
13_1_20cm_4_scaffold_1305_8
unknown

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5559..5849
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_4_scaffold_1305_9
unknown

Not on your lists

5892..6290
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_4_scaffold_1305_10
unknown

Not on your lists

comp(6787..7044)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_4_scaffold_1305_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7041..7844)
DNA (804bp) protein (268aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ6_KORVE
Transcriptional regulator, LytR/AlgR family {ECO:0000313|EMBL:ABF40004.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
LytR/AlgR family transcriptional regulator
13_1_20cm_4_scaffold_1305_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

8071..8673
DNA (603bp) protein (201aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
NUDIX hydrolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P205_GRAMM
NUDIX hydrolase
13_1_20cm_4_scaffold_1305_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

9170..10966
DNA (1797bp) protein (599aa)
DNA polymerase X family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP10_KORVE
phosphotransferase domain-containing protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
DNA polymerase X family protein
13_1_20cm_4_scaffold_1305_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11066..11644
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371FC56
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_4_scaffold_1305_15
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12245..13396
DNA (1152bp) protein (384aa)
Histidine kinase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB2_9BACT
hypothetical protein Tax=CG_Ignavi_01
histidine kinase internal region
13_1_20cm_4_scaffold_1305_16
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13393..13740
DNA (348bp) protein (116aa)
DNA-binding response regulator Tax=GWF1_Xanthomonadales_69_6_curated
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
LytT family two-component response regulator
Displaying 16 items

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