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13_1_20cm_4_scaffold_1065

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1065_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..1662
DNA (1662bp) protein (554aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A491_GEMAT
13_1_20cm_4_scaffold_1065_2
unknown

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1631..1918
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_1065_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1915..2223
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A489_GEMAT
hypothetical protein; K09888 cell division protein ZapA Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF710
13_1_20cm_4_scaffold_1065_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2276..3700
DNA (1425bp) protein (475aa)
Ribonuclease Y n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A488_GEMAT
hypothetical protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1065_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3690..4577
DNA (888bp) protein (296aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:3.5.4.9 1.5.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD id=4569404 bin=GWC2_Planctomycetes_45_44 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good rbh
13_1_20cm_4_scaffold_1065_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4646..5707
DNA (1062bp) protein (354aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Exodeoxyribonuclease 7 large subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A486_GEMAT
Exodeoxyribonuclease 7 large subunit
13_1_20cm_4_scaffold_1065_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5691..5882
DNA (192bp) protein (64aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] id=1250686 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_20cm_4_scaffold_1065_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5866..6738
DNA (873bp) protein (291aa)
geranyltranstransferase (EC:2.5.1.10); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Geranyltranstransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A484_GEMAT
Polyprenyl synthetase
13_1_20cm_4_scaffold_1065_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6735..8633
DNA (1899bp) protein (633aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A483_GEMAT rbh
13_1_20cm_4_scaffold_1065_10
unknown

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8752..9354
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_20cm_4_scaffold_1065_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9680..11110
DNA (1431bp) protein (477aa)
DNA repair protein RecN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A481_GEMAT
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RecN
13_1_20cm_4_scaffold_1065_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(11034..12131)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_1065_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(12201..13472)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE88_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:AEN72080.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
hypothetical protein
13_1_20cm_4_scaffold_1065_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13486..14403)
DNA (918bp) protein (306aa)
long-chain fatty acid transporter n=1 Tax=Salisaeta longa RepID=UPI0003B60388
fadL; Long-chain fatty acid transport protein; K06076 long-chain fatty acid transport protein Tax=GWC2_Gemmatimonadetes_71_10_curated
membrane protein involved in aromatic hydrocarbon degradation
Displaying 14 items

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