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13_1_20cm_4_scaffold_120

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Displaying items 1-30 of 118 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_120_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_120_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(155..940)
DNA (786bp) protein (262aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W9_GEMAT
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_20cm_4_scaffold_120_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(943..1830)
DNA (888bp) protein (296aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_4_scaffold_120_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1875..2861)
DNA (987bp) protein (329aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
13_1_20cm_4_scaffold_120_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2858..3871)
DNA (1014bp) protein (338aa)
plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT
Phosphate acyltransferase
13_1_20cm_4_scaffold_120_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(3871..4050)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=12 Tax=Lactobacillus RepID=RL32_LACPL
rpmF; 50S ribosomal protein L32 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L32
13_1_20cm_4_scaffold_120_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4067..4579)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X4_GEMAT
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF177
13_1_20cm_4_scaffold_120_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4622..5032)
DNA (411bp) protein (137aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleoside diphosphate kinase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZVB5_MELRP
nucleoside diphosphate kinase
13_1_20cm_4_scaffold_120_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5043..5921)
DNA (879bp) protein (293aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
13_1_20cm_4_scaffold_120_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5918..7060)
DNA (1143bp) protein (381aa)
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT rbh
Succinyl-CoA ligase [ADP-forming] subunit beta
13_1_20cm_4_scaffold_120_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7057..7995)
DNA (939bp) protein (313aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CS31_METMJ
13_1_20cm_4_scaffold_120_12
unknown

Not on your lists

comp(8007..8507)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_4_scaffold_120_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8720..10357)
DNA (1638bp) protein (546aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UPF0182
13_1_20cm_4_scaffold_120_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10354..11430)
DNA (1077bp) protein (359aa)
manB; phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphomannomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_20cm_4_scaffold_120_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11510..13135)
DNA (1626bp) protein (542aa)
nuoN; NADH-quinone oxidoreductase chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=NUON_GEMAT
NAD(P)H-quinone oxidoreductase subunit 2
13_1_20cm_4_scaffold_120_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13132..14673)
DNA (1542bp) protein (514aa)
NADH dehydrogenase subunit M (EC:1.6.5.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase I subunit M id=1250619 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_20cm_4_scaffold_120_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14673..16652)
DNA (1980bp) protein (660aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
13_1_20cm_4_scaffold_120_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16649..16759)
DNA (111bp) protein (37aa)
nuoK; NADH dehydrogenase I subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_120_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16806..17321)
DNA (516bp) protein (172aa)
nuoJ; NADH-quinone oxidoreductase chain J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase chain J n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y5_GEMAT
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_20cm_4_scaffold_120_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17331..17837)
DNA (507bp) protein (169aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
13_1_20cm_4_scaffold_120_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17837..19000)
DNA (1164bp) protein (388aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
13_1_20cm_4_scaffold_120_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18997..20445)
DNA (1449bp) protein (483aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
13_1_20cm_4_scaffold_120_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20445..21728)
DNA (1284bp) protein (428aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_20cm_4_scaffold_120_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21809..22315)
DNA (507bp) protein (169aa)
nuoE; NADH-quinone oxidoreductase chain E (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit
13_1_20cm_4_scaffold_120_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22312..23580)
DNA (1269bp) protein (423aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
13_1_20cm_4_scaffold_120_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23577..24170)
DNA (594bp) protein (198aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
NAD(P)H-quinone oxidoreductase subunit J
13_1_20cm_4_scaffold_120_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24167..24772)
DNA (606bp) protein (202aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_20cm_4_scaffold_120_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24777..25142)
DNA (366bp) protein (122aa)
nuoA-1; NADH dehydrogenase I subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit A n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZL7_GEODF
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_20cm_4_scaffold_120_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25263..25790
DNA (528bp) protein (176aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=GWC2_Gemmatimonadetes_71_10_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
13_1_20cm_4_scaffold_120_30
unknown

Not on your lists

comp(25795..26211)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying items 1-30 of 118 in total

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