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13_1_20cm_4_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_161_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..684)
DNA (684bp) protein (228aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glutamine synthetase n=2 Tax=Thermus thermophilus RepID=Q5SIP0_THET8
glutamine synthetase, type I
13_1_20cm_4_scaffold_161_2
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(766..2235)
DNA (1470bp) protein (490aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Glutamine synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBY2_THET1
glutamine synthetase, type I
13_1_20cm_4_scaffold_161_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2414..2665)
DNA (252bp) protein (84aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_161_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2723..3424
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_20cm_4_scaffold_161_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3421..4284
DNA (864bp) protein (288aa)
ABC transporter substrate-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C427E
periplasmic solute-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF178
13_1_20cm_4_scaffold_161_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4315..5388
DNA (1074bp) protein (358aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_1_20cm_4_scaffold_161_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5537..5965)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_161_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6130..7392
DNA (1263bp) protein (421aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_161_9
unknown

Not on your lists

comp(7389..7520)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_20cm_4_scaffold_161_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7663..8463
DNA (801bp) protein (267aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A650_GEMAT
AraC family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Helix-turn-helix, AraC domain-containing protein
13_1_20cm_4_scaffold_161_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8460..8876
DNA (417bp) protein (139aa)
Sensor histidine kinase/response regulator n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJK4_DEHSV
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_20cm_4_scaffold_161_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8873..9508
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_161_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9569..10138
DNA (570bp) protein (190aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=4169647 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
LemA family protein
13_1_20cm_4_scaffold_161_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10185..11132
DNA (948bp) protein (316aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Protease HtpX homolog id=2725088 bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptidase M48 Ste24p
13_1_20cm_4_scaffold_161_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11192..11380
DNA (189bp) protein (63aa)
glycerol-3-phosphate acyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_161_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11990..12610)
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_161_17
unknown

Not on your lists

12660..13172
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_20cm_4_scaffold_161_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13206..15185)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_161_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15262..15555
DNA (294bp) protein (98aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated
Cold-shock DNA-binding domain protein id=2197703 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cold-shock protein
13_1_20cm_4_scaffold_161_20
unknown

Not on your lists

15626..16171
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_4_scaffold_161_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16168..17091)
DNA (924bp) protein (308aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Probable ADP-ribosylglycohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
13_1_20cm_4_scaffold_161_22
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17115..17918
DNA (804bp) protein (268aa)
Putative Peptidase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVH5_9BACT
alpha/beta superfamily hydrolase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_20cm_4_scaffold_161_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17911..18753)
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_161_24
RLO_PLX_64_10, Bacteria

Not on your lists

18942..19940
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002E0AA1D
putative Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative branched-chain amino acid-binding protein
13_1_20cm_4_scaffold_161_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19937..21607
DNA (1671bp) protein (557aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_161_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21604..21936)
DNA (333bp) protein (111aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_161_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22314..22529
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_1_20cm_4_scaffold_161_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22531..23256)
DNA (726bp) protein (242aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K1_GEMAT
signal peptidase I
13_1_20cm_4_scaffold_161_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23253..24272)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q2_GEMAT
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_161_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24330..24650
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 44 in total

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