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13_1_20cm_4_scaffold_1737

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1737_1

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comp(3..194)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO11257.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_1737_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(196..585)
DNA (390bp) protein (130aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNX5_SINAD
Putative transcriptional regulator {ECO:0000313|EMBL:AGA30366.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singuli
transcriptional regulator
13_1_20cm_4_scaffold_1737_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(659..2635)
DNA (1977bp) protein (659aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI5_RHOM4
putative S9C family serine peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_4_scaffold_1737_4
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2656..3393)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVY7_MARPU
Uncharacterized protein {ECO:0000313|EMBL:AHF03382.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpur
hypothetical protein
13_1_20cm_4_scaffold_1737_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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3420..4616
DNA (1197bp) protein (399aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382EFE5
glycine cleavage T protein (aminomethyl transferase)
13_1_20cm_4_scaffold_1737_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4613..6190
DNA (1578bp) protein (526aa)
FAD dependent oxidoreductase n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JB99_9BACT rbh
FAD dependent oxidoreductase Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_1737_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6187..7593
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363C3DF
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_1737_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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7590..8594
DNA (1005bp) protein (335aa)
Iron-sulfur cluster-binding protein, Rieske family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JHI2_SYNJB
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_Chloroflexi_54_18_curated
Rieske family iron-sulfur cluster-binding protein
13_1_20cm_4_scaffold_1737_9
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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8599..9045
DNA (447bp) protein (149aa)
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:AGY57095.1}; EC=4.1.1.25 {ECO:0000313|EMBL:AGY57095.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter
pyridoxal-dependent decarboxylase (EC:4.1.1.25)
Pyridoxal-dependent decarboxylase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHE8_9CYAN
13_1_20cm_4_scaffold_1737_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9005..9697
DNA (693bp) protein (231aa)
Tyrosine decarboxylase (EC:4.1.1.25) Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Tyrosine decarboxylase (EC:4.1.1.25)
Pyridoxal-dependent decarboxylase id=4426037 bin=GWC2_Ignavibacteria_56_12 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_20cm_4_scaffold_1737_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9694..11847)
DNA (2154bp) protein (718aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY8_RHOM4
TonB-dependent receptor {ECO:0000313|EMBL:ACY47773.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
TonB-dependent receptor
13_1_20cm_4_scaffold_1737_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11909..13096
DNA (1188bp) protein (396aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
protein of unknown function DUF989
13_1_20cm_4_scaffold_1737_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(13093..14676)
DNA (1584bp) protein (528aa)
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
amidase
13_1_20cm_4_scaffold_1737_14
CSP1_5_NC10, NC10, Bacteria

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14865..16112
DNA (1248bp) protein (416aa)
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
13_1_20cm_4_scaffold_1737_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

16090..16341
DNA (252bp) protein (84aa)
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
13_1_20cm_4_scaffold_1737_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16322..17059)
DNA (738bp) protein (246aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_20cm_4_scaffold_1737_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17263..17439
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0F18
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_20cm_4_scaffold_1737_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17454..17663
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
13_1_20cm_4_scaffold_1737_19
unknown

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comp(17718..17918)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_4_scaffold_1737_20
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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18074..18757
DNA (684bp) protein (228aa)
two component LuxR family transcriptional regulator Tax=RBG_13_Ignavibacteria_36_8_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
LuxR family two component transcriptional regulator
13_1_20cm_4_scaffold_1737_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18765..19340)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37771.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_1737_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19337..19798)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying 22 items

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