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13_1_20cm_4_scaffold_2642

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2642_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..437)
DNA (435bp) protein (145aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_20cm_4_scaffold_2642_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(438..1469)
DNA (1032bp) protein (344aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T4_GEMAT
Putative oxidoreductase {ECO:0000313|EMBL:BAH37944.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
putative oxidoreductase
13_1_20cm_4_scaffold_2642_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1466..2149)
DNA (684bp) protein (228aa)
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative cation transporter id=3298087 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
MgtC/SapB transporter
13_1_20cm_4_scaffold_2642_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2142..3131)
DNA (990bp) protein (330aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_20cm_4_scaffold_2642_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3188..3940
DNA (753bp) protein (251aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Inositol-1-monophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T2_GEMAT
inositol monophosphatase
13_1_20cm_4_scaffold_2642_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3940..5364
DNA (1425bp) protein (475aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
13_1_20cm_4_scaffold_2642_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5357..6112)
DNA (756bp) protein (252aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methionine aminopeptidase n=1 Tax=Desmospora sp. 8437 RepID=F5SID7_9BACL rbh
methionine aminopeptidase, type I
13_1_20cm_4_scaffold_2642_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6109..6672)
DNA (564bp) protein (188aa)
adenylate kinase family protein (EC:2.7.4.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UVW5_9LEPT
13_1_20cm_4_scaffold_2642_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6672..6956)
DNA (285bp) protein (95aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gemmatimonadetes_66_8_curated
Suspect SCG annotation. See neighboring gene [13_1_20cm_4_scaffold_2642_10].
secY; preprotein translocase secY subunit
13_1_20cm_4_scaffold_2642_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(7001..7840)
DNA (840bp) protein (280aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein translocase subunit SecY
13_1_20cm_4_scaffold_2642_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(7837..8361)
DNA (525bp) protein (175aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplO; 50S ribosomal protein L15
13_1_20cm_4_scaffold_2642_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(8362..8631)
DNA (270bp) protein (90aa)
50S ribosomal protein L30 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S3_GEMAT
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L30
13_1_20cm_4_scaffold_2642_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(8624..9373)
DNA (750bp) protein (250aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S5
13_1_20cm_4_scaffold_2642_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(9373..9603)
DNA (231bp) protein (77aa)
50S ribosomal protein L18 n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9UIS8_PAEAL
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L18
13_1_20cm_4_scaffold_2642_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(9607..10152)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=GWC2_Gemmatimonadetes_71_10_curated
rplF; 50S ribosomal protein L6
13_1_20cm_4_scaffold_2642_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(10163..10558)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R9_GEMAT
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S8
13_1_20cm_4_scaffold_2642_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(10571..10756)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 n=1 Tax=Bacillus coahuilensis RepID=UPI00018509DF
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsZ; ribosomal protein S14p/S29e
13_1_20cm_4_scaffold_2642_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(10765..11454)
DNA (690bp) protein (230aa)
50S ribosomal protein L5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R7_GEMAT
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribosomal protein L5
13_1_20cm_4_scaffold_2642_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(11457..11840)
DNA (384bp) protein (128aa)
50S ribosomal protein L24 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R6_GEMAT
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein L24
13_1_20cm_4_scaffold_2642_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(11842..12210)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Clavibacter michiganensis RepID=RL14_CLAM3
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein L14
13_1_20cm_4_scaffold_2642_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(12213..12491)
DNA (279bp) protein (93aa)
30S ribosomal protein S17 n=2 Tax=Rhodothermus marinus RepID=D0MGW3_RHOM4
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
30S ribosomal protein S17
13_1_20cm_4_scaffold_2642_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(12488..12697)
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL29_GEMAT
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmC; 50S ribosomal protein L29
13_1_20cm_4_scaffold_2642_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(12699..13112)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L16
13_1_20cm_4_scaffold_2642_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(13116..13775)
DNA (660bp) protein (220aa)
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsC; 30S ribosomal protein S3
13_1_20cm_4_scaffold_2642_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(13776..14126)
DNA (351bp) protein (117aa)
50S ribosomal protein L22 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9I0_OCEP5
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
50S ribosomal protein L22
13_1_20cm_4_scaffold_2642_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(14130..14471)
DNA (342bp) protein (114aa)
30S ribosomal protein S19 n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00037B774C
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
30S ribosomal protein S19
13_1_20cm_4_scaffold_2642_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(14471..15079)
DNA (609bp) protein (203aa)
50S ribosomal protein L2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL2_GEMAT
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein L2
13_1_20cm_4_scaffold_2642_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(15175..15462)
DNA (288bp) protein (96aa)
50S ribosomal protein L23 n=2 Tax=Anaeromyxobacter RepID=RL23_ANAD2
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein L25/L23
13_1_20cm_4_scaffold_2642_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(15455..16111)
DNA (657bp) protein (219aa)
50S ribosomal protein L4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Q6_GEMAT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L4/L1e
13_1_20cm_4_scaffold_2642_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(16104..16724)
DNA (621bp) protein (207aa)
50S ribosomal protein L3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Q5_GEMAT
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Ribosomal protein L3
Displaying items 1-30 of 32 in total

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