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13_1_20cm_4_scaffold_39

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Displaying items 1-30 of 100 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_39_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..1385)
DNA (1383bp) protein (461aa)
RagB/SusD domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GNW3_9BACT
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RagB/SusD domain-containing protein
13_1_20cm_4_scaffold_39_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1404..4694)
DNA (3291bp) protein (1097aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000382553C rbh
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89786.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane protein, SusC/RagA
13_1_20cm_4_scaffold_39_3
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4827..5138)
DNA (312bp) protein (104aa)
Monoamine regulon transcriptional regulator Tax=RBG_13_Planctomycetes_46_10_curated
13_1_20cm_4_scaffold_39_4

Not on your lists

comp(5177..5740)
DNA (564bp) protein (188aa)
Marine sediment metagenome DNA, contig: S06H3_S02778 {ECO:0000313|EMBL:GAI21775.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative GCN5-related N-acetyltransferase id=12554023 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyltransferase
13_1_20cm_4_scaffold_39_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5730..7919)
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003792F76
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:CDM64608.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
choline dehydrogenase-like flavoprotein
13_1_20cm_4_scaffold_39_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7933..8844)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PU00_9FLAO rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_39_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8882..9703)
DNA (822bp) protein (274aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG92307.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Xylose isomerase domain-containing protein TIM barrel
13_1_20cm_4_scaffold_39_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9729..11411
DNA (1683bp) protein (561aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
Beta-N-acetylhexosaminidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B4_GEMAT
beta-N-acetylhexosaminidase
13_1_20cm_4_scaffold_39_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11408..12301)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003618488
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AHG93162.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glycoside hydrolase family 16
13_1_20cm_4_scaffold_39_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12285..13025)
DNA (741bp) protein (247aa)
Lipolytic protein G-D-S-L family n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S2G7_9PLAN
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AHG88259.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
lipolytic protein G-D-S-L family
13_1_20cm_4_scaffold_39_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13022..14293)
DNA (1272bp) protein (424aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WU2_SOLUE
Amino acid permease-associated region {ECO:0000313|EMBL:AHG93554.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease-associated region
13_1_20cm_4_scaffold_39_12
unknown

Not on your lists

comp(14296..14472)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_39_13
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(14469..15062)
DNA (594bp) protein (198aa)
Candidate acetyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZF3_RAMTT
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_39_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15265..15555)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLH7_SORCE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function UPF0047
13_1_20cm_4_scaffold_39_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15612..16670
DNA (1059bp) protein (353aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A634_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative two-component histidine kinase
13_1_20cm_4_scaffold_39_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16667..18052
DNA (1386bp) protein (462aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A631_GEMAT
putative NtrC family two-component response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative NtrC family two-component response regulator
13_1_20cm_4_scaffold_39_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18049..19782
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A630_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_39_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19784..20428
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A629_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_39_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20403..20801)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG89711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Uncharacterized protein id=4815622 bin=GWC2_Deltaproteobacteria_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_1_20cm_4_scaffold_39_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20801..21349)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A628_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_39_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21488..22879)
DNA (1392bp) protein (464aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N7_GEMAT
13_1_20cm_4_scaffold_39_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22863..24107)
DNA (1245bp) protein (415aa)
argininosuccinate synthase family protein (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Argininosuccinate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA16_SPHTD rbh
Argininosuccinate synthase
13_1_20cm_4_scaffold_39_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24209..25606)
DNA (1398bp) protein (466aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA6_RHOMR
oxidoreductase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain-containing protein
13_1_20cm_4_scaffold_39_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25603..26325)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_39_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26322..26783)
DNA (462bp) protein (154aa)
Arginine repressor n=3 Tax=Dehalobacter RepID=K4KQL1_9FIRM
ArgR; arginine repressor; K03402 transcriptional regulator of arginine metabolism Tax=RBG_16_Gemmatimonadetes_66_8_curated
Arginine repressor
13_1_20cm_4_scaffold_39_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26780..27961)
DNA (1182bp) protein (394aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
cytosine deaminase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase
13_1_20cm_4_scaffold_39_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27990..28871)
DNA (882bp) protein (294aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein
13_1_20cm_4_scaffold_39_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28838..30061)
DNA (1224bp) protein (408aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein, 1A family
13_1_20cm_4_scaffold_39_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

30099..31364
DNA (1266bp) protein (422aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tyrosine--tRNA ligase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=SYY_ANASK
Tyrosyl-tRNA synthetase
13_1_20cm_4_scaffold_39_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31380..31844
DNA (465bp) protein (155aa)
Smu13B n=1 Tax=uncultured organism RepID=Q0GNJ3_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 100 in total

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