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13_1_20cm_4_scaffold_534

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_534_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..2265)
DNA (2265bp) protein (755aa)
TonB-denpendent receptor n=1 Tax=Spirosoma spitsbergense RepID=UPI00035C581D
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93773.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane protein, SusC/RagA
13_1_20cm_4_scaffold_534_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2379..4526
DNA (2148bp) protein (716aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000366F4E9
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_534_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5073..6026
DNA (954bp) protein (318aa)
symporter n=1 Tax=Salisaeta longa RepID=UPI0003B46B0A
Putative symporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
symporter
13_1_20cm_4_scaffold_534_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6023..7642
DNA (1620bp) protein (540aa)
tre37A; trehalase tre37A (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cytoplasmic trehalase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N1H9_9BACT
glycoside hydrolase family 37
13_1_20cm_4_scaffold_534_5
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

7671..8114
DNA (444bp) protein (148aa)
id=12557778 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_4_scaffold_534_6
Cyanobium sp. PCC 7001, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8154..9473
DNA (1320bp) protein (440aa)
Amino acid permease-associated region, putative n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJZ1_9CHRO
Amino acid permease-associated region, putative {ECO:0000313|EMBL:EDY39542.1}; TaxID=180281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. P
putative permease
13_1_20cm_4_scaffold_534_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9424..9768)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036C87FD
hypothetical protein; K09137 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_534_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9776..10150)
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=2 Tax=Geobacter metallireducens RepID=CRCB_GEOMG
crcB; camphor resistance protein CrcB; K06199 CrcB protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CrcB-like protein
13_1_20cm_4_scaffold_534_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10253..11041
DNA (789bp) protein (263aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nadE; NH(3)-dependent NAD (+) synthetase (EC:6.3.5.1)
NH(3)-dependent NAD (+) synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM9_GEMAT
13_1_20cm_4_scaffold_534_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10989..11933
DNA (945bp) protein (315aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NH(3)-dependent NAD(+) synthetase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZX6_9BACT
NH(3)-dependent NAD(+) synthetase
13_1_20cm_4_scaffold_534_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11933..12427
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE3_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
thioesterase superfamily protein
13_1_20cm_4_scaffold_534_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12420..13181
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_534_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

13186..13587
DNA (402bp) protein (134aa)
signal-transduction protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
signal-transduction protein id=1245892 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_534_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13587..14000
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2203
13_1_20cm_4_scaffold_534_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13997..14449
DNA (453bp) protein (151aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_534_16
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

14751..15236
DNA (486bp) protein (162aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Elusimicrobia_69_24_curated
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4718612 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HAD-superfamily hydrolase, subfamily IA, variant 3
13_1_20cm_4_scaffold_534_17
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15236..15937
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W483_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFA92530.1}; TaxID=679190 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis ATCC 35310.;
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
13_1_20cm_4_scaffold_534_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

15934..16767
DNA (834bp) protein (278aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14625639 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_534_19
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16764..18083
DNA (1320bp) protein (440aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK61_9BACT
aminotransferase class-III Tax=CG_Ignavi_01
13_1_20cm_4_scaffold_534_20
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18070..18921
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HNN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40926.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
CDP-alcohol phosphatidyltransferase superfamily protein
13_1_20cm_4_scaffold_534_21
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18905..19906
DNA (1002bp) protein (334aa)
SpcH n=1 Tax=Streptomyces netropsis RepID=Q9S1L2_STRNE
Oxidoreductase domain protein Tax=CG_Ignavi_01
Oxidoreductase domain protein
13_1_20cm_4_scaffold_534_22
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19903..20907
DNA (1005bp) protein (335aa)
Putative transmembrane protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZR17_MELRP
Putative transmembrane protein {ECO:0000313|EMBL:AFN74504.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Meliorib
transmembrane protein
13_1_20cm_4_scaffold_534_23
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

20904..21341
DNA (438bp) protein (146aa)
id=3025508 Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
13_1_20cm_4_scaffold_534_24
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

21305..21910
DNA (606bp) protein (202aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYD0_PYRAB
pgsA-like; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
13_1_20cm_4_scaffold_534_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21910..22761
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_534_26
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22758..23888
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J529_ANAD2
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL64884.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
group 1 glycosyl transferase
13_1_20cm_4_scaffold_534_27
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23885..24529
DNA (645bp) protein (215aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J530_ANAD2
Polysaccharide deacetylase {ECO:0000313|EMBL:ACL64885.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
polysaccharide deacetylase
13_1_20cm_4_scaffold_534_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24459..25103)
DNA (645bp) protein (215aa)
Putative adenine glycosylase {ECO:0000313|EMBL:BAH37866.1}; EC=3.2.2.- {ECO:0000313|EMBL:BAH37866.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimon
putative adenine glycosylase (EC:3.2.2.-)
Endonuclease III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K6_GEMAT
13_1_20cm_4_scaffold_534_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25274..25777
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJR6_RHOMR
putative transporter; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_534_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25774..26568
DNA (795bp) protein (265aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
putative ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
Displaying items 1-30 of 35 in total

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