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13_1_20cm_4_scaffold_129_8

Organism: 13_1_20CM_4_Gemmatimonadetes_66_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 6183..6728

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 144
  • Evalue 9.90e-32
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 1.00e-34
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 2.10e-35

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 546
ATGGTGAATGAAGACGCCGACGTAGTCGCCCGGGTGCTCGCTGGCGATGGGGAGGCGTTCGGGATTCTCATCCGGCGATATGAGCCGGGTCTGCTTCGCTTCGCAACGCGGATGCTCGGGAATCCCGACGCGGCGGCGGATGCGGTGGCTGAGAGTTTCGTGCGCGCCTATCGGCATTTGGCACAATGCCGCGATCCGTCGCGGCTGCGGAGCTGGCTGTACCGGATTACCGGGAATCGCTGTCGCAGCCATCTCGCCCGGCGGCACACGAACGACGTTCCGCTGAGCGAGGCCCCCGCGCCAGCGCTGGCGGAGGCGTCGGACACCTGGGAAATACTCGAGCGCAGTGAGCAGGTCGCACTGGTAGAGCGGGCGCTGGCGGCGTTGCCGGCCGAAAAACGTGAGGCGTTCGTCCTGAAGCACGTGGAAGGGATGAGCTACGAGGAGATGGCGGCGGTGACCGGGGCACGCATCCCCACGCTCAAGATGCGGGTGCATCGGGCGCGGGAAGCGTTGCTGGAGGCGCTGGAGGAGGTCGTACGATGA
PROTEIN sequence
Length: 182
MVNEDADVVARVLAGDGEAFGILIRRYEPGLLRFATRMLGNPDAAADAVAESFVRAYRHLAQCRDPSRLRSWLYRITGNRCRSHLARRHTNDVPLSEAPAPALAEASDTWEILERSEQVALVERALAALPAEKREAFVLKHVEGMSYEEMAAVTGARIPTLKMRVHRAREALLEALEEVVR*