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13_1_20cm_4_scaffold_170

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_170_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..716)
DNA (714bp) protein (238aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

827..1570
DNA (744bp) protein (248aa)
Transcriptional regulator, TrmB n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB62_ACIB4
transcriptional regulator, TrmB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcriptional regulator, TrmB
13_1_20cm_4_scaffold_170_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1580..2788
DNA (1209bp) protein (403aa)
Geranylgeranyl reductase n=1 Tax=mine drainage metagenome RepID=T1A8J4_9ZZZZ
geranylgeranyl reductase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
geranylgeranyl reductase family protein
13_1_20cm_4_scaffold_170_4
unknown

Not on your lists

comp(2816..3619)
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_20cm_4_scaffold_170_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3847..4521)
DNA (675bp) protein (225aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein id=14632957 bin=bin9_gal15 species=Deinococcus apachensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
13_1_20cm_4_scaffold_170_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4780..6003)
DNA (1224bp) protein (408aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDA9_ACIB4
RNA-metabolising metallo-beta-lactamase; K07577 putative mRNA 3-end processing factor Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-metabolising metallo-beta-lactamase
13_1_20cm_4_scaffold_170_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6031..7128)
DNA (1098bp) protein (366aa)
2,3-di-O-geranylgeranylglyceryl phosphate reductase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW88_METMJ
geranylgeranyl reductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
geranylgeranyl reductase
13_1_20cm_4_scaffold_170_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7141..8076)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360C7AE
Geranylgeranyl pyrophosphate synthase Tax=RBG_16_Euryarchaeota_68_13_curated
Geranylgeranyl pyrophosphate synthase
13_1_20cm_4_scaffold_170_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8233..9543)
DNA (1311bp) protein (437aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9747..11012
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
putative signal transduction protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_170_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11045..11464
DNA (420bp) protein (140aa)
Thioredoxin 1 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9C7_9ARCH
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative thioredoxin (modular protein)
13_1_20cm_4_scaffold_170_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11467..12342)
DNA (876bp) protein (292aa)
Iron-sulfur cluster assembly/repair protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWF2_SYNAS rbh
iron-sulfur cluster assembly/repair protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
iron-sulfur cluster assembly/repair protein
13_1_20cm_4_scaffold_170_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12400..13185)
DNA (786bp) protein (262aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13339..13650)
DNA (312bp) protein (104aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_170_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13840..15234
DNA (1395bp) protein (465aa)
malate dehydrogenase (EC:1.1.1.40); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E07C3
NADP-dependent malic enzyme
13_1_20cm_4_scaffold_170_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

15330..15542
DNA (213bp) protein (71aa)
malate dehydrogenase (EC:1.1.1.40); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_170_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15529..16653)
DNA (1125bp) protein (375aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J933_METBM
nucleotidyltransferase/DNA polymerase involved in DNA repair Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16728..18308)
DNA (1581bp) protein (527aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003807592
fpoN; F420H2 dehydrogenase subunit
13_1_20cm_4_scaffold_170_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18310..19719)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4
NADH-ubiquinone oxidoreductase chain M Tax=RBG_16_Euryarchaeota_67_27_curated
NADH-ubiquinone oxidoreductase chain M
13_1_20cm_4_scaffold_170_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19720..21315)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4 rbh
NADH-ubiquinone oxidoreductase chain M Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH-ubiquinone oxidoreductase chain M
13_1_20cm_4_scaffold_170_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(21318..23426)
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003726D78 rbh
NADH-ubiquinone oxidoreductase chain L Tax=RBG_16_Euryarchaeota_68_13_curated
NADH-ubiquinone oxidoreductase chain L
13_1_20cm_4_scaffold_170_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(23430..23732)
DNA (303bp) protein (101aa)
NADH-ubiquinone oxidoreductase chain 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368E3B2
F420H2 dehydrogenase subunit K
13_1_20cm_4_scaffold_170_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(23729..23992)
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_170_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23989..24234)
DNA (246bp) protein (82aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJC1_9EURY
NADH:ubiquinone oxidoreductase subunit 6 (chain J)
13_1_20cm_4_scaffold_170_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(24316..25599)
DNA (1284bp) protein (428aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Euryarchaeota_68_13_curated
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4D3_9EURY rbh
13_1_20cm_4_scaffold_170_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(25596..26690)
DNA (1095bp) protein (365aa)
NADH dehydrogenase I subunit D n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T502_9EURY
NADH dehydrogenase I subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH dehydrogenase I subunit D
13_1_20cm_4_scaffold_170_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(26690..27226)
DNA (537bp) protein (179aa)
NADH dehydrogenase subunit C (EC:1.6.99.5) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BHH9_9EURY
NADH (or F420H2) dehydrogenase, subunit C
13_1_20cm_4_scaffold_170_28
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(27223..27453)
DNA (231bp) protein (77aa)
NADH:ubiquinone oxidoreductase subunit 3 (Chain A) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7I0_9EURY
NADH:ubiquinone oxidoreductase subunit 3 (chain A) Tax=RBG_16_Euryarchaeota_68_13_curated
NADH:ubiquinone oxidoreductase subunit 3 (chain A)
13_1_20cm_4_scaffold_170_29
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

27636..28202
DNA (567bp) protein (189aa)
Oxidoreductase, molybdopterin binding n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCE2_9BACT
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
oxidoreductase, molybdopterin binding
Displaying 29 items

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