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13_1_20cm_4_scaffold_2075

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2075_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(28..1236)
DNA (1209bp) protein (403aa)
tRNA pseudouridine synthase Pus10 n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LIR3_METBM
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative pseudouridylate synthase
13_1_20cm_4_scaffold_2075_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1267..1671)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Lactobacillus kisonensis F0435 RepID=H1LDI2_9LACO
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1668..2534)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=3 Tax=Thermoanaerobacter RepID=G2MVV6_9THEO
hypothetical protein; K07090 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_4
unknown

Not on your lists

comp(2763..3074)
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_4_scaffold_2075_5
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(3260..3490)
DNA (231bp) protein (77aa)
DNA/RNA-binding protein Alba n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXS3_FERPA
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivoran
DNA/RNA-binding protein Alba
13_1_20cm_4_scaffold_2075_6
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

3531..3833
DNA (303bp) protein (101aa)
Preprotein translocase subunit SecG n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TCN7_9EURY
Sec61beta family protein Tax=RBG_16_Euryarchaeota_62_10_curated
13_1_20cm_4_scaffold_2075_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

3876..4658
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YFF7_9ACTO
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

4630..4890
DNA (261bp) protein (87aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_2075_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5026..5211)
DNA (186bp) protein (62aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_2075_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5251..6192)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003608D7C
protease DO family protein Tax=RBG_16_Euryarchaeota_68_12_curated
protease DO family protein
13_1_20cm_4_scaffold_2075_11
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6400..6798)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HJE1_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY66952.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespira
hypothetical protein
13_1_20cm_4_scaffold_2075_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6833..7222)
DNA (390bp) protein (130aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Glyoxalase-like domain
source missing description 7..119 id=1245680 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_2075_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7399..10161
DNA (2763bp) protein (921aa)
PKD domain containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FJT8_9EURY
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
cell surface protein
13_1_20cm_4_scaffold_2075_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10039..11247)
DNA (1209bp) protein (403aa)
Arabinose efflux permease n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEF8_CHLTF
arabinose efflux permease Tax=RBG_16_Archaea_50_20_curated
arabinose efflux permease
13_1_20cm_4_scaffold_2075_15
unknown

Not on your lists

11589..11831
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_4_scaffold_2075_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(12307..13350)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037EDDEE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
OmpA/MotB domain-containing protein
13_1_20cm_4_scaffold_2075_trna_1
unknown

Not on your lists

comp(13567..13648)
DNA (82bp)
transferRNA
13_1_20cm_4_scaffold_2075_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13742..13957
DNA (216bp) protein (72aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_2075_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

13954..14541
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Y7K7_9PSEU
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_13_curated
Hypothetical protein
13_1_20cm_4_scaffold_2075_19
unknown

Not on your lists

14538..14636
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_4_scaffold_2075_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14752..15237
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF56_9CHLR
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15501..16802
DNA (1302bp) protein (434aa)
Glycine dehydrogenase (decarboxylating) (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Glycine dehydrogenase (decarboxylating) (EC:1.4.4.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003641DBA rbh
13_1_20cm_4_scaffold_2075_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

16799..18118
DNA (1320bp) protein (440aa)
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 id=1734691 bin=GWB2_Clostridiales_37_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
13_1_20cm_4_scaffold_2075_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18113..18760)
DNA (648bp) protein (216aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZD2_METBU
hypothetical protein; K07142 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18778..19872)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6X2_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_2075_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(19937..20590)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374FB15
translation initiation factor eIF-6; K03264 translation initiation factor 6 Tax=RBG_16_Euryarchaeota_68_13_curated
translation initiation factor IF-6
13_1_20cm_4_scaffold_2075_26
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20601..20864)
DNA (264bp) protein (88aa)
50S ribosomal protein L31e n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YWH1_9EURY
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=RBG_16_Euryarchaeota_68_13_curated
50S ribosomal protein L31e
13_1_20cm_4_scaffold_2075_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20869..21024)
DNA (156bp) protein (52aa)
50S ribosomal protein L39e n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGR7_ACIB4
ribosomal protein L39e; K02924 large subunit ribosomal protein L39e Tax=RBG_16_Euryarchaeota_68_13_curated
ribosomal protein L39e
13_1_20cm_4_scaffold_2075_28
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(21026..21361)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003714F93
DNA-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
DNA-binding protein
13_1_20cm_4_scaffold_2075_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(21366..21830)
DNA (465bp) protein (155aa)
30S ribosomal protein S19e n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFD7_ACIB4
ribosomal protein S19e; K02966 small subunit ribosomal protein S19e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein S19e
Displaying items 1-30 of 33 in total

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