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13_1_20cm_4_scaffold_10982

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_10982_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..432
DNA (432bp) protein (144aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_13_Deltaproteobacteria_53_10_curated
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P2L2_9FIRM
AMP-dependent synthetase and ligase
13_1_20cm_4_scaffold_10982_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(429..773)
DNA (345bp) protein (115aa)
two component sigma-54 specific Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWA2_Rokubacteria_73_35_curated
Two component, sigma54 specific, Fis family transcriptional regulator id=4040234 bin=GWA2_Methylomirabilis_73_35 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG)
13_1_20cm_4_scaffold_10982_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(986..1642)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
Putative uncharacterized protein id=4436777 bin=GWF2_Lentisphaerae_49_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
13_1_20cm_4_scaffold_10982_4
R_NC10_66_22, NC10, Bacteria

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comp(1639..2853)
DNA (1215bp) protein (405aa)
Membrane protein, major facilitator superfamily n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EE82_GEOBB
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MFS transporter
13_1_20cm_4_scaffold_10982_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2879..4021)
DNA (1143bp) protein (381aa)
acyltransferase domain-containing protein Tax=CSP1_6_Rokubacteria
acyltransferase domain-containing protein id=14627706 bin=bin7_NC10_sister species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phospholipid/glycerol acyltransferase
13_1_20cm_4_scaffold_10982_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4018..4398)
DNA (381bp) protein (127aa)
putative thiol-disulfide oxidoreductase DCC Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=4040228 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase DCC
13_1_20cm_4_scaffold_10982_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4380..4577)
DNA (198bp) protein (66aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4040227 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_10982_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4592..5974)
DNA (1383bp) protein (461aa)
class III aminotransferase Tax=GWA2_Rokubacteria_73_35_curated
class III aminotransferase id=14626831 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10 rbh
class III aminotransferase
13_1_20cm_4_scaffold_10982_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5991..6332)
DNA (342bp) protein (114aa)
AIG2 family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AIG2 family protein id=4040225 bin=GWA2_Methylomirabilis_73_35 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_10982_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6650..7078)
DNA (429bp) protein (143aa)
glutaredoxin-like domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glutaredoxin-like domain protein id=4040223 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutaredoxin-like domain-containing protein
13_1_20cm_4_scaffold_10982_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7243..7422
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_10982_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7480..9360
DNA (1881bp) protein (627aa)
3-ketoacyl-ACP synthase III (EC:2.3.1.180) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-ketoacyl-ACP synthase III (EC:2.3.1.180) id=14625088 bin=bin7_NC10_sister species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
3-ketoacyl-ACP synthase III (EC:2.3.1.180)
13_1_20cm_4_scaffold_10982_13
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9345..10139)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD98909.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_1_20cm_4_scaffold_10982_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10153..10539)
DNA (387bp) protein (129aa)
acetolactate synthase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Acetolactate synthase id=4040222 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora spinosa genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate TPP binding domain-containing protein
Displaying 14 items

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