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13_1_20cm_4_scaffold_1150

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1150_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..984)
DNA (984bp) protein (328aa)
Lactate dehydrogenase-related dehydrogenase (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxyacid dehydrogenase, putative id=2961537 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_20cm_4_scaffold_1150_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1018..1980
DNA (963bp) protein (321aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWC2_Rokubacteria_70_16_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=3010429 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_20cm_4_scaffold_1150_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1982..3028
DNA (1047bp) protein (349aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase id=2961591 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
zinc-containing alcohol dehydrogenase superfamily protein
13_1_20cm_4_scaffold_1150_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3025..3780
DNA (756bp) protein (252aa)
bifunctional pyrazinamidase/nicotinamidase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035ED9CF
Pyrazinamidase/nicotinamidase {ECO:0000313|EMBL:AHY55659.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
pncA; bifunctional pyrazinamidase/nicotinamidase
13_1_20cm_4_scaffold_1150_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3911..5464
DNA (1554bp) protein (518aa)
putative ABC transporter periplasmic binding protein A; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter periplasmic binding protein A
13_1_20cm_4_scaffold_1150_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5495..6439
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z6_SPHTD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_4_scaffold_1150_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6432..7277
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036286A9
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
peptide ABC transporter permease
13_1_20cm_4_scaffold_1150_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7345..7848
DNA (504bp) protein (168aa)
transcriptional regulator, MarR family Tax=GWA2_Rokubacteria_73_35_curated
Transcriptional regulator, MarR family id=2855590 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
regulatory protein MarR
13_1_20cm_4_scaffold_1150_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7845..9056
DNA (1212bp) protein (404aa)
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Efflux transporter, RND family, MFP subunit id=4900365 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
RND family efflux transporter MFP subunit
13_1_20cm_4_scaffold_1150_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9053..10336
DNA (1284bp) protein (428aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWA2_Rokubacteria_73_35_curated
Acriflavin resistance protein id=2855764 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
Displaying 10 items

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