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13_1_20cm_4_scaffold_1195

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1195_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..463)
DNA (462bp) protein (154aa)
pyrrolidone-carboxylate peptidase (EC:3.4.19.3); K01304 pyroglutamyl-peptidase [EC:3.4.19.3] Tax=GWA2_Rokubacteria_73_35_curated
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase id=4930056 bin=GWA2_Methylomirabilis_73_35 species=Pyrococcus furiosus genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1195_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(471..1853)
DNA (1383bp) protein (461aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14625975 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase
13_1_20cm_4_scaffold_1195_3
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2229..3038
DNA (810bp) protein (270aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
13_1_20cm_4_scaffold_1195_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3035..4024)
DNA (990bp) protein (330aa)
transketolase, central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Pyruvate dehydrogenase E1 component subunit beta id=4930068 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase, central region
13_1_20cm_4_scaffold_1195_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4083..4676)
DNA (594bp) protein (198aa)
pyruvate dehydrogenase; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) id=4930070 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1195_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4697..5074)
DNA (378bp) protein (126aa)
pyruvate dehydrogenase; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) id=4930070 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1195_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..5973
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037BB768
aldolase Tax=RBG_16_Betaproteobacteria_64_18_curated
class II aldolase/adducin-like protein
13_1_20cm_4_scaffold_1195_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5983..6954
DNA (972bp) protein (324aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=GWA2_Rokubacteria_70_23_curated
Alcohol dehydrogenase, zinc-binding domain protein id=3139745 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_20cm_4_scaffold_1195_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6964..7845)
DNA (882bp) protein (294aa)
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=GWA2_Rokubacteria_73_35_curated
Probable DNA repair protein Anae109_0938 id=4930072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Ku family containing protein
13_1_20cm_4_scaffold_1195_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7900..9309
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCF9_9BACT
hypothetical protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_1195_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9302..11941
DNA (2640bp) protein (880aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=14626956 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA ligase D
13_1_20cm_4_scaffold_1195_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11938..12432
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF6_RUBXD
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABG04622.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_1195_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12429..12938)
DNA (510bp) protein (170aa)
Phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=GWA2_Rokubacteria_73_35_curated
Sortase-like acyltransferase id=4930076 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase
13_1_20cm_4_scaffold_1195_14
unknown

Not on your lists

comp(12928..13134)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_4_scaffold_1195_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13640..13972
DNA (333bp) protein (111aa)
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4930080 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LysR family transcriptional regulator
13_1_20cm_4_scaffold_1195_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13943..14671)
DNA (729bp) protein (243aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1195_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14659..15771)
DNA (1113bp) protein (371aa)
L-alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=GWA2_Rokubacteria_73_35_curated
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase id=4930084 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_1195_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15853..16695)
DNA (843bp) protein (281aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4930094 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase
13_1_20cm_4_scaffold_1195_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16766..17650)
DNA (885bp) protein (295aa)
sugar ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289328B
binding-protein-dependent transport system inner membrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
binding-protein-dependent transport system inner membrane protein
Displaying 19 items

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