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13_1_20cm_4_scaffold_1227

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1227_1
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1661
DNA (1659bp) protein (553aa)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) {ECO:0000313|EMBL:EGW19751.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EGW19751.1};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methyl
aldehyde dehydrogenase (EC:1.2.99.3)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1Z5_9GAMM
13_1_20cm_4_scaffold_1227_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1731..2633)
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95180.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutathione transport system permease GsiD; K02034 peptide/nickel transport system permease protein id=14431363 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_20cm_4_scaffold_1227_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2647..3597)
DNA (951bp) protein (317aa)
dppB; peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC transporter permease id=3709817 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB3; PepT family ABC transporter permease
13_1_20cm_4_scaffold_1227_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3646..5115)
DNA (1470bp) protein (490aa)
dipeptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Hemin-binding lipoprotein id=4243810 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_1227_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5418..5915)
DNA (498bp) protein (166aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=2884818 bin=GWC2_Methylomirabilis_70_24 species=Commensalibacter intestini genus=Commensalibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_1227_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6001..6543)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2884826 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_1227_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6540..6872)
DNA (333bp) protein (111aa)
proline-rich region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3160383 bin=GWA2_OP3_53_43 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
13_1_20cm_4_scaffold_1227_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7082..7456
DNA (375bp) protein (125aa)
id=4143380 Tax=GWA2_Rokubacteria_70_23_curated
id=4143380 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1227_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7747..9462
DNA (1716bp) protein (572aa)
Amidohydrolase 3 n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3C1C4_STRMB
Uncharacterized protein {ECO:0000313|EMBL:ETW96406.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase 3
13_1_20cm_4_scaffold_1227_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..10249)
DNA (780bp) protein (260aa)
Class II aldolase/adducin-like protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W0S2_9BURK rbh
Aldolase {ECO:0000313|EMBL:KIF79886.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
13_1_20cm_4_scaffold_1227_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10369..11463
DNA (1095bp) protein (365aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_68_12_curated
DNA polymerase IV n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XLS9_PROPF
ImpB/MucB/SamB family protein
13_1_20cm_4_scaffold_1227_12
unknown

Not on your lists

comp(11507..11647)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_4_scaffold_1227_13
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(11737..12804)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003725FFB
Uncharacterized protein {ECO:0000313|EMBL:ADH64387.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus sil
hypothetical protein
13_1_20cm_4_scaffold_1227_14
unknown

Not on your lists

comp(12801..13436)
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_20cm_4_scaffold_1227_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13433..14167)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08438.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
gliding motility ABC transporter auxillary protein id=24429612 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
gliding motility ABC transporter auxillary protein
Displaying 15 items

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