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13_1_20cm_4_scaffold_144

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_144_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1..948
DNA (948bp) protein (316aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=GWA2_Rokubacteria_73_35_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Putative lipid-transfer protein id=2589435 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_144_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

953..1459
DNA (507bp) protein (169aa)
protein of unknown function DUF35 Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2589434 bin=GWA2_Methylomirabilis_73_35 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_144_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1463..1900)
DNA (438bp) protein (146aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14627878 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_144_4
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1920..2792)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000377418A rbh
coxD; putative ATPase chaperone CoxD Tax=RBG_16_Actinobacteria_68_21_curated
coxD; putative ATPase chaperone CoxD
13_1_20cm_4_scaffold_144_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2798..3862)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E1B87D rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
13_1_20cm_4_scaffold_144_6
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3859..4731)
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Pseudomonas sp. GM78 RepID=J3I8H9_9PSED rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJN18203.1}; Flags: Precursor;; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
ABC transporter permease
13_1_20cm_4_scaffold_144_7
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4735..5433)
DNA (699bp) protein (233aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Pseudomonas sp. GM78 RepID=J2WHG7_9PSED
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curate
ABC transporter family protein
13_1_20cm_4_scaffold_144_8
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5453..6205)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003680E3E
putative branched-chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_1_20cm_4_scaffold_144_9
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6209..7549)
DNA (1341bp) protein (447aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Pseudomonas sp. GM74 RepID=J3BIM3_9PSED rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJM86173.1}; Flags: Precursor;; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_144_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7560..8543)
DNA (984bp) protein (328aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625207 bin=bin7_NC10_sister species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hydroxyquinol 1,2-dioxygenase
13_1_20cm_4_scaffold_144_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8596..9096)
DNA (501bp) protein (167aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625206 bin=bin7_NC10_sister species=Sphingomonas sp. TTNP3 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hydroxyquinol 1,2-dioxygenase
13_1_20cm_4_scaffold_144_12
unknown

Not on your lists

comp(9189..9962)
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_20cm_4_scaffold_144_13

Not on your lists

10109..11497
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037ABE6F
Uncharacterized protein {ECO:0000313|EMBL:KGA21673.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
13_1_20cm_4_scaffold_144_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11525..12529
DNA (1005bp) protein (335aa)
Luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
Luciferase-like monooxygenase id=2589433 bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
13_1_20cm_4_scaffold_144_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12593..13540)
DNA (948bp) protein (316aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2589431 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_144_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13578..13847)
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_4_scaffold_144_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13848..14642)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R593_RALPI
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_4_scaffold_144_18
Geobacillus sp. CAMR5420, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14648..15547)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036F7706
Acetamidase {ECO:0000313|EMBL:KDE47973.1}; TaxID=1482739 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. CAMR5420.;"
acetamidase/formamidase
13_1_20cm_4_scaffold_144_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15544..15762)
DNA (219bp) protein (73aa)
selenoprotein Tax=GWA2_Rokubacteria_73_35_curated
Selenoprotein id=2589430 bin=GWA2_Methylomirabilis_73_35 species=Roseobacter sp. GAI101 genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
selenoprotein
13_1_20cm_4_scaffold_144_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15784..16062)
DNA (279bp) protein (93aa)
selenoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Selenoprotein id=3285643 bin=GWC2_Methylomirabilis_70_24 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenoprotein
13_1_20cm_4_scaffold_144_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16078..17133)
DNA (1056bp) protein (352aa)
thiol-disulfide oxidoreductase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_144_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17189..17992)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5E277_9GAMM rbh
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
haloacid dehalogenase
13_1_20cm_4_scaffold_144_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18165..18857)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4232686 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_144_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18854..20167)
DNA (1314bp) protein (438aa)
hypothetical protein; K07161 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Carbon monoxide dehydrogenase E protein id=3285633 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_144_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20170..20646)
DNA (477bp) protein (159aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=4232681 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATPase
13_1_20cm_4_scaffold_144_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21732..21995
DNA (264bp) protein (88aa)
Ste24 endopeptidase; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ste24 endopeptidase (EC:3.4.24.84)
Ste24 endopeptidase id=4232679 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_144_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21992..22873
DNA (882bp) protein (294aa)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23 4.1.3.-)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=GWA2_Rokubacteria_73_35_curated
Putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase id=2772881 bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_144_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22843..23514)
DNA (672bp) protein (224aa)
spsK; Spore coat polysaccharide biosynthesis protein spsK Tax=GWA2_Rokubacteria_73_35_curated
Spore coat polysaccharide biosynthesis protein spsK id=2772882 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
spsK; Spore coat polysaccharide biosynthesis protein spsK
Displaying 28 items

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