name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_20cm_4_scaffold_1504_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
1..696
|
Integral membrane protein TerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC43_9BACT
integral membrane protein TerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
integral membrane protein TerC
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13_1_20cm_4_scaffold_1504_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
753..1475
|
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
FadR; transcriptional regulator
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13_1_20cm_4_scaffold_1504_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
1800..4502
|
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=14626757 bin=bin7_NC10_sister species=Methanohalophilus mahii genus=Methanohalophilus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
rbh
pyruvate phosphate dikinase (EC:2.7.9.1)
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|
13_1_20cm_4_scaffold_1504_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
4495..5382
|
HOGA1, C10orf65; 4-hydroxy-2-oxoglutarate aldolase 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=4827367 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Galliformes taxon_class=Aves phylum=Chordata tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dihydrodipicolinate synthase/N-acetylneuraminate lyase
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13_1_20cm_4_scaffold_1504_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
5395..6582
|
ilvI; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ilvB; acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit id=3910682 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_20cm_4_scaffold_1504_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
6576..7004
|
ilvI; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ilvI; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=24519536 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ilvI; acetolactate synthase large subunit (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) (EC:2.2.1.6)
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13_1_20cm_4_scaffold_1504_7
unknown
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Not on your lists |
comp(7106..7237)
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This feature has no annotations |
|
13_1_20cm_4_scaffold_1504_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
7310..7444
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ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Acetolactate synthase, small subunit id=4827365 bin=GWC2_Methylomirabilis_70_16 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
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13_1_20cm_4_scaffold_1504_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
7478..8485
|
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) Tax=GWA2_Rokubacteria_70_23_curated
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Ketol-acid reductoisomerase id=4800877 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rbh
|
|
13_1_20cm_4_scaffold_1504_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
8489..9115
|
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme id=3910763 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_20cm_4_scaffold_1504_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
9225..10019
|
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
CDP-diacylglycerol/serine O-phosphatidyltransferase id=3910764 bin=GWF2_Methylomirabilis_70_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CDP-diacylglycerol--serine O-phosphatidyltransferase
|
|
13_1_20cm_4_scaffold_1504_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
10034..11434
|
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=14626750 bin=bin7_NC10_sister species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
leuA2; 2-isopropylmalate synthase (EC:2.3.3.13)
|
|
13_1_20cm_4_scaffold_1504_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
11440..12525
|
leuB; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) (EC:1.1.1.85) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-isopropylmalate dehydrogenase id=4703436 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
3-isopropylmalate dehydrogenase
|
|
13_1_20cm_4_scaffold_1504_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
12525..13529
|
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11) Tax=GWA2_Rokubacteria_73_35_curated
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=3910768 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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|
13_1_20cm_4_scaffold_1504_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
13560..13886
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4703405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_20cm_4_scaffold_1504_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
13910..14629
|
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
Pseudouridylate synthase I id=4703404 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_20cm_4_scaffold_1504_17
unknown
|
Not on your lists |
14706..14975
|
This feature has no annotations |
|
13_1_20cm_4_scaffold_1504_18
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15017..15334)
|
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI000377DA02
thiol disulfide isomerase; K08481 circadian clock protein KaiB Tax=GWA2_Rhodocyclales_65_20_curated
KaiB domain-containing protein
|
|
13_1_20cm_4_scaffold_1504_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15337..16950)
|
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000367295C
recombinase A; K08482 circadian clock protein KaiC Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
recombinase A
|
|
13_1_20cm_4_scaffold_1504_20
unknown
|
Not on your lists |
17030..17233
|
This feature has no annotations |
|
13_1_20cm_4_scaffold_1504_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
18161..18934
|
formate dehydrogenase family accessory protein (FdhD) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=4703403 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase family accessory protein (FdhD)
|
|
13_1_20cm_4_scaffold_1504_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
19099..19458
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4703402 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_20cm_4_scaffold_1504_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19544..19822
|
id=24540628 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3227803 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
|
|
13_1_20cm_4_scaffold_1504_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
19886..22831
|
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CSP1_6_Rokubacteria
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=14627927 bin=bin7_NC10_sister species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
formate dehydrogenase subunit alpha
|
|
13_1_20cm_4_scaffold_1504_25
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
22834..23610
|
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit id=14627926 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
4Fe-4S ferredoxin
|
|
13_1_20cm_4_scaffold_1504_26
R_NC10_66_22, NC10, Bacteria
|
Not on your lists |
23610..24545
|
polysulfide reductase NrfD; K04015 protein NrfD Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Polysulfide reductase NrfD; K04015 protein NrfD id=14627925 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
polysulfide reductase NrfD
|
|
13_1_20cm_4_scaffold_1504_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
24827..25405
|
formate dehydrogenase formation protein; K02380 FdhE protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein involved in formate dehydrogenase formation id=3227780 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
formate dehydrogenase accessory protein
|
|
13_1_20cm_4_scaffold_1504_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
25472..26284
|
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ResC/HemX-like cytochrome c biogenesis membrane protein id=3448980 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ResC/HemX-like cytochrome c biogenesis membrane protein
|
|
13_1_20cm_4_scaffold_1504_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
26323..27591
|
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamyl-tRNA reductase id=3448982 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hemA; glutamyl-tRNA reductase
|
|
13_1_20cm_4_scaffold_1504_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
27800..28702
|
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Porphobilinogen deaminase id=3448984 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Porphobilinogen deaminase
|