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13_1_20cm_4_scaffold_15833

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_15833_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=GWA2_Rokubacteria_73_35_curated
dihydrodipicolinate synthase (EC:4.3.3.7)
Dihydrodipicolinate synthase id=2164672 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_15833_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

209..1063
DNA (855bp) protein (285aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=2164669 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_15833_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1486..1719
DNA (234bp) protein (78aa)
ureidoglycolate lyase (EC:4.3.2.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase id=14627106 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_15833_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1719..2078
DNA (360bp) protein (120aa)
folQ; dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=GWA2_Rokubacteria_73_35_curated
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase id=2164663 bin=GWA2_Methylomirabilis_73_35 species=Streptococcus ictaluri genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_15833_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2078..2626
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_02_FULL_Rokubact
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase id=2164593 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_4_scaffold_15833_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2633..3142
DNA (510bp) protein (170aa)
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RNA polymerase sigma factor RpoE
13_1_20cm_4_scaffold_15833_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3142..3846
DNA (705bp) protein (235aa)
id=14627111 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627111 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_15833_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3960..4229
DNA (270bp) protein (90aa)
prevent-host-death family protein Tax=GWA2_Rokubacteria_70_23_curated
Prevent-host-death family protein id=3773177 bin=GWC2_Methylomirabilis_70_24 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death family protein
13_1_20cm_4_scaffold_15833_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4226..4552
DNA (327bp) protein (109aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Plasmid stabilization system id=3773179 bin=GWC2_Methylomirabilis_70_24 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_15833_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4594..5751)
DNA (1158bp) protein (386aa)
O-Antigen Polymerase family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
O-Antigen Polymerase family id=14627112 bin=bin7_NC10_sister species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
O-Antigen Polymerase family
13_1_20cm_4_scaffold_15833_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5748..6662)
DNA (915bp) protein (305aa)
capsular polysaccharide synthesis protein (cpsA) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative capsular polysaccharide synthesis protein (CpsA) id=2250553 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
capsular polysaccharide synthesis protein (cpsA)
13_1_20cm_4_scaffold_15833_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6665..6970)
DNA (306bp) protein (102aa)
putative undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.-)
capsular polysaccharide synthesis protein (cpsA) Tax=GWC2_Rokubacteria_70_16_curated
Putative capsular polysaccharide synthesis protein (CpsA) id=2250553 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_20cm_4_scaffold_15833_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6964..8106)
DNA (1143bp) protein (381aa)
putative glycosyl transferase, group 1 (EC:2.4.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase id=4814558 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyltransferase
13_1_20cm_4_scaffold_15833_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8172..9026)
DNA (855bp) protein (285aa)
NAD-dependent epimerase/dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=GWC2_Rokubacteria_70_16_curated
NAD-dependent epimerase/dehydratase id=4814559 bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent epimerase
Displaying 14 items

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