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13_1_20cm_4_scaffold_2343

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2343_1
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2..1459)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4UAH6_OCEP5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADR37681.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus
hypothetical protein
13_1_20cm_4_scaffold_2343_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2772..3779)
DNA (1008bp) protein (336aa)
alcohol dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
Alcohol dehydrogenase GroES domain protein id=4531413 bin=GWF2_Methylomirabilis_70_14 species=Rhizobium sp. PDO1-076 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase GroES domain-containing protein
13_1_20cm_4_scaffold_2343_3
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3788..4363)
DNA (576bp) protein (192aa)
Cupin 2 protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N50_JANSC
Cupin 2 protein {ECO:0000313|EMBL:ABD55862.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1
cupin 2 protein
13_1_20cm_4_scaffold_2343_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4511..5782
DNA (1272bp) protein (424aa)
livJ; putative branched-chain amino acid ABC transporter binding component; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor id=3987077 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_2343_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5824..6666
DNA (843bp) protein (281aa)
livM; putative branched-chain amino acid ABC transporter permease component; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Putative branched-chain amino acid ABC transporter permease component id=4346127 bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livM; branched-chain amino acid ABC transporter permease
13_1_20cm_4_scaffold_2343_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6667..7602
DNA (936bp) protein (312aa)
livH; putative branched chain amino acid ABC transporter permease component; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport system permease protein LivM id=4166560 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH; branched chain amino acid ABC transporter permease
13_1_20cm_4_scaffold_2343_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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7611..8336
DNA (726bp) protein (242aa)
livG; putative branched-chain amino acid ABC transporter ATP-binding component; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curate
Putative branched-chain amino acid ABC transporter ATP-binding component id=4166559 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livG; branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_2343_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8344..9057
DNA (714bp) protein (238aa)
livF; putative high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport ATP-binding protein LivF id=4166558 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
13_1_20cm_4_scaffold_2343_9
unknown

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comp(9427..9732)
DNA (306bp) protein (102aa)

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Displaying 9 items

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