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13_1_20cm_4_scaffold_264

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_264_1
unknown

Not on your lists

comp(3..836)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_20cm_4_scaffold_264_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1097..2287
DNA (1191bp) protein (397aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acyl-CoA dehydrogenase domain-containing protein id=14626979 bin=bin7_NC10_sister species=Novosphingobium sp. Rr 2-17 genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_264_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2353..3135)
DNA (783bp) protein (261aa)
short-chain dehydrogenase (EC:1.1.1.-) Tax=GWC2_Rokubacteria_70_16_curated
Short-chain dehydrogenase id=3202782 bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
13_1_20cm_4_scaffold_264_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3248..3664
DNA (417bp) protein (139aa)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3995088 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_264_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3670..4752
DNA (1083bp) protein (361aa)
thiolase Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2961869 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
thiolase
13_1_20cm_4_scaffold_264_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4793..5293
DNA (501bp) protein (167aa)
CHRD domain containing protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZH04_9PROT
CHRD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
CHRD domain-containing protein
13_1_20cm_4_scaffold_264_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5300..6355)
DNA (1056bp) protein (352aa)
tartrate dehydrogenase (EC:4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] Tax=GWA2_Rokubacteria_73_35_curated
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase id=4468110 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_20cm_4_scaffold_264_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6352..6741)
DNA (390bp) protein (130aa)
3-oxoadipate enol-lactonase; K14727 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] Tax=GWC2_Rokubacteria_70_16_curated
4-carboxymuconolactone decarboxylase id=4681029 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
carboxymuconolactone decarboxylase
13_1_20cm_4_scaffold_264_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7111..7938
DNA (828bp) protein (276aa)
Lytic transglycosylase, catalytic Tax=GWC2_Rokubacteria_70_16_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_264_10
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

7954..9057
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_20cm_4_scaffold_264_11
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

9379..9678
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_20cm_4_scaffold_264_12
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

9713..10282
DNA (570bp) protein (190aa)
Transport-associated protein n=1 Tax=Brenneria sp. EniD312 RepID=G7LSL2_9ENTR
transport associated protein Tax=CG_Elusi_04
hypothetical protein
13_1_20cm_4_scaffold_264_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10347..11750
DNA (1404bp) protein (468aa)
putative UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_16_RIF_WS3X_71_46_curated
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT id=5223295 bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
13_1_20cm_4_scaffold_264_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11851..12834)
DNA (984bp) protein (328aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=2395057 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_264_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12852..13769)
DNA (918bp) protein (306aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3995087 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_264_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13841..15520)
DNA (1680bp) protein (560aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=GWA2_Rokubacteria_73_35_curated
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase id=4942496 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_264_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15534..15929)
DNA (396bp) protein (132aa)
pilT2; protein PilT Tax=GWA2_Rokubacteria_70_23_curated
Protein PilT id=4362593 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
twitching motility protein PilT
13_1_20cm_4_scaffold_264_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15926..16243)
DNA (318bp) protein (106aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Gsl3799 protein id=4362591 bin=GWC2_Methylomirabilis_70_24 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death protein
13_1_20cm_4_scaffold_264_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16338..16712)
DNA (375bp) protein (125aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4279015 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_264_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16771..17997
DNA (1227bp) protein (409aa)
major facilitator superfamily MFS_1 Tax=GWA2_Rokubacteria_73_35_curated
Major facilitator superfamily MFS_1 id=4183754 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
major facilitator superfamily MFS_1
13_1_20cm_4_scaffold_264_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18007..18330
DNA (324bp) protein (108aa)
id=3864198 Tax=GWC2_Rokubacteria_70_16_curated
id=3864198 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_264_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18327..20288
DNA (1962bp) protein (654aa)
peptidase S9 prolyl oligopeptidase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptidase S9 prolyl oligopeptidase id=12550217 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
peptidase
13_1_20cm_4_scaffold_264_23
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20285..21286
DNA (1002bp) protein (334aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHP5_ANASK
Uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:GAO05157.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; A
phage SPO1 DNA polymerase-like protein
13_1_20cm_4_scaffold_264_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21297..21758
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4677000 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_264_25
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21808..22533)
DNA (726bp) protein (242aa)
IPT/TIG domain-containing protein,collagen triple helix repeat protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMK6_TERRK
triple helix repeat-containing collagen Tax=RBG_16_Deltaproteobacteria_49_23_curated
IPT/TIG domain-containing protein,collagen triple helix repeat protein
13_1_20cm_4_scaffold_264_26

Not on your lists

comp(22572..23993)
DNA (1422bp) protein (474aa)
pyridoxal-dependent decarboxylase (EC:4.1.1.28)
Pyridoxal-dependent decarboxylase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKN2_METNO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN43772.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_264_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(24004..24936)
DNA (933bp) protein (311aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Inner-membrane translocator id=4646463 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter permiase component
13_1_20cm_4_scaffold_264_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24933..25802)
DNA (870bp) protein (290aa)
ABC transporter integral membrane subunit; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type transporter, integral membrane subunit id=4646461 bin=GWA2_Methylomirabilis_73_35 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_20cm_4_scaffold_264_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25888..26601)
DNA (714bp) protein (238aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Salicylaldehyde dehydrogenase (Modular protein) id=4646459 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_264_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26594..27319)
DNA (726bp) protein (242aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter related id=4646457 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Displaying items 1-30 of 34 in total

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