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13_1_20cm_4_scaffold_2815

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2815_1
unknown

Not on your lists

comp(132..308)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_2815_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

821..1381
DNA (561bp) protein (187aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4219879 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_2815_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1395..2417)
DNA (1023bp) protein (341aa)
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase
13_1_20cm_4_scaffold_2815_4
unknown

Not on your lists

2642..2836
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_2815_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2858..3784)
DNA (927bp) protein (309aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_2815_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3781..4113)
DNA (333bp) protein (111aa)
carboxymuconolactone decarboxylase (EC:1.11.1.15) Tax=GWA2_Rokubacteria_73_35_curated
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase id=3352295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_2815_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4136..4939)
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=2521453 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_20cm_4_scaffold_2815_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5030..5785
DNA (756bp) protein (252aa)
beta-lactamase class B Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
beta-lactamase class B id=14627174 bin=bin7_NC10_sister species=Amycolatopsis balhimycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
putative Zn-dependent hydrolase
13_1_20cm_4_scaffold_2815_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5911..6888
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251 rbh
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_20cm_4_scaffold_2815_10
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6885..7493
DNA (609bp) protein (203aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFD9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EGO65264.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonem
hypothetical protein
13_1_20cm_4_scaffold_2815_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7591..9231)
DNA (1641bp) protein (547aa)
Amidase n=1 Tax=Geobacillus kaustophilus GBlys RepID=U2X652_GEOKU rbh
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase {ECO:0000313|EMBL:AHY46237.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase
13_1_20cm_4_scaffold_2815_12
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9228..9698)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XQB4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ33216.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
13_1_20cm_4_scaffold_2815_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9855..11171
DNA (1317bp) protein (439aa)
aminotransferase class-III; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWA2_Rokubacteria_73_35_curated
Glutamate-1-semialdehyde 2,1-aminomutase id=3222459 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
aminotransferase class-III
13_1_20cm_4_scaffold_2815_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11619..12104
DNA (486bp) protein (162aa)
putative competence-damaged protein, CinA like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Competence/damage-inducible protein cinA id=4829158 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence/damage-inducible protein cinA
13_1_20cm_4_scaffold_2815_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

12125..12862
DNA (738bp) protein (246aa)
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_20cm_4_scaffold_2815_16
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

12956..13678
DNA (723bp) protein (241aa)
Glr3327 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NG46_GLOVI
Glr3327 protein {ECO:0000313|EMBL:BAC91268.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_4_scaffold_2815_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13690..14070)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB96523.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
13_1_20cm_4_scaffold_2815_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14030..14839)
DNA (810bp) protein (270aa)
high-affinity nickel-transport family protein Tax=GWC2_Rokubacteria_70_16_curated
High-affinity nickel-transport family protein id=2750987 bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
high-affinity nickel-transporter
13_1_20cm_4_scaffold_2815_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15252..15827)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBU6_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_4_scaffold_2815_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15989..18637)
DNA (2649bp) protein (883aa)
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator Tax=GWA2_Rokubacteria_73_35_curated
Putative transmembrane signal transduction receptor and sigma-54 dependent response regulator id=4221518 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator
13_1_20cm_4_scaffold_2815_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18675..19736)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat id=4221516 bin=GWA2_Methylomirabilis_73_35 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_2815_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19791..21335)
DNA (1545bp) protein (515aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=GWA2_Rokubacteria_70_23_curated
Amidohydrolase id=3138545 bin=GWC2_Methylomirabilis_70_24 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
amidohydrolase
13_1_20cm_4_scaffold_2815_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21388..21714)
DNA (327bp) protein (109aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3327080 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_2815_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22068..22508)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KF71_9MICO
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
DoxX family protein
13_1_20cm_4_scaffold_2815_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23070..23507
DNA (438bp) protein (146aa)
Rieske iron-sulfur protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G3E8_9BRAD
Rieske iron-sulfur protein {ECO:0000313|EMBL:AHY53275.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
2Fe-2S ferredoxin
13_1_20cm_4_scaffold_2815_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23564..25285
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036B33BF
Alcohol dehydrogenase PQQ-dependent, large subunit {ECO:0000313|EMBL:GAN76593.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera
alcohol dehydrogenase
13_1_20cm_4_scaffold_2815_27
unknown

Not on your lists

25384..25776
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_4_scaffold_2815_28
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25899..26363
DNA (465bp) protein (155aa)
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:AEK62117.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AEK62117.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase alpha subunit n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A911_COLFT
13_1_20cm_4_scaffold_2815_29
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26360..26845
DNA (486bp) protein (162aa)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) {ECO:0000313|EMBL:EGW19751.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EGW19751.1};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methyl
aldehyde dehydrogenase (EC:1.2.99.3)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1Z5_9GAMM
Displaying 29 items

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