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13_1_20cm_4_scaffold_2900

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2900_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..790
DNA (789bp) protein (263aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiazole synthase id=5006704 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiG; thiazole synthase
13_1_20cm_4_scaffold_2900_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1241..2098
DNA (858bp) protein (286aa)
glycine oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=GWA2_Rokubacteria_70_23_curated
thiO; glycine oxidase ThiO (EC:1.4.3.19)
Putative glycine oxidase id=4584627 bin=GWF2_Methylomirabilis_70_14 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_2900_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2517..2945
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14629111 bin=bin8_Chloro species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_4_scaffold_2900_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2965..3852)
DNA (888bp) protein (296aa)
two-component hybrid sensor and regulator Tax=GWA2_Rokubacteria_73_35_curated
Two-component hybrid sensor and regulator id=5006707 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative hybrid sensor histidine kinase
13_1_20cm_4_scaffold_2900_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3925..5253
DNA (1329bp) protein (443aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidohydrolase id=4800307 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amidohydrolase
13_1_20cm_4_scaffold_2900_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5259..6062
DNA (804bp) protein (268aa)
ABC transporter periplasmic ligand binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Periplasmic binding protein id=5006709 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
periplasmic-binding protein
13_1_20cm_4_scaffold_2900_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6167..7615
DNA (1449bp) protein (483aa)
tldD; peptidase TldD Tax=GWA2_Rokubacteria_73_35_curated
Putative peptidase TldD id=4888043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
tldD; peptidase TldD
13_1_20cm_4_scaffold_2900_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7767..8558
DNA (792bp) protein (264aa)
pmbA; protease pmbA; K03592 PmbA protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase U62 id=5006712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 8 items

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