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13_1_20cm_4_scaffold_312

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_312_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=14626564 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_312_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

436..1311
DNA (876bp) protein (292aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4388235 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_312_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1308..2189
DNA (882bp) protein (294aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Peptidase, M23/M37 family id=4388234 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_312_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2674..3693)
DNA (1020bp) protein (340aa)
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase id=3659323 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_312_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3695..4090)
DNA (396bp) protein (132aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=4388230 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_312_6
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4118..4597
DNA (480bp) protein (160aa)
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
hypothetical protein id=14624306 bin=bin5_DeltaP species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_312_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4627..5553
DNA (927bp) protein (309aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3784125 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_312_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5570..6361
DNA (792bp) protein (264aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.-); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=GWC2_Rokubacteria_70_16_curated
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.-)
Oxidoreductase family protein id=4638236 bin=GWC2_Methylomirabilis_70_16 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_312_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6365..6997
DNA (633bp) protein (211aa)
MutT/nudix family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MutT/nudix family protein id=4388224 bin=GWA2_Methylomirabilis_73_35 species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MutT/nudix family protein
13_1_20cm_4_scaffold_312_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7178..7966
DNA (789bp) protein (263aa)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain alcohol dehydrogenase id=4888002 bin=GWC2_Methylomirabilis_70_24 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
short chain dehydrogenase family protein
13_1_20cm_4_scaffold_312_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7977..8261
DNA (285bp) protein (95aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Peroxiredoxin id=4388219 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_312_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8283..8888
DNA (606bp) protein (202aa)
redoxin domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
Redoxin domain protein id=3951920 bin=GWF2_Methylomirabilis_70_14 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
redoxin domain-containing protein
13_1_20cm_4_scaffold_312_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8892..9884
DNA (993bp) protein (331aa)
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
Short-chain dehydrogenase/reductase SDR id=4638242 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_312_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9881..10369
DNA (489bp) protein (163aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein tyrosine phosphatase id=3951923 bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein tyrosine phosphatase
13_1_20cm_4_scaffold_312_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10366..11340
DNA (975bp) protein (325aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3219593 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus taiwanensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_312_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11477..12475
DNA (999bp) protein (333aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_312_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12472..12696
DNA (225bp) protein (75aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3703493 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_312_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12683..13249
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3703495 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_312_19
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13302..14303
DNA (1002bp) protein (334aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN rbh
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_312_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14300..15289
DNA (990bp) protein (330aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_312_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15286..16299
DNA (1014bp) protein (338aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_312_22
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16906..17514
DNA (609bp) protein (203aa)
UPI0003CFFFEE related cluster n=1 Tax=unknown RepID=UPI0003CFFFEE
Uncharacterized protein {ECO:0000313|EMBL:ESZ43578.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
electron transport protein SCO1/SenC
13_1_20cm_4_scaffold_312_23
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17511..19019
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" sourc
histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y592_LEPCP rbh
13_1_20cm_4_scaffold_312_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19004..19378
DNA (375bp) protein (125aa)
response regulator receiver protein; K11443 two-component system, cell cycle response regulator DivK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator receiver protein id=3112750 bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator receiver protein
13_1_20cm_4_scaffold_312_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19375..20469
DNA (1095bp) protein (365aa)
adenylate/guanylate cyclase Tax=GWC2_Rokubacteria_70_16_curated
Adenylate/guanylate cyclase id=3112748 bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
adenylate/guanylate cyclase
13_1_20cm_4_scaffold_312_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20444..20779)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E80A3
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
peptide ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_312_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20776..21297)
DNA (522bp) protein (174aa)
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Oligopeptide/dipeptide ABC transporter, ATP-binding protein id=4621969 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_312_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21294..22271)
DNA (978bp) protein (326aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Oligopeptide ABC transporter ATP-binding protein id=4621968 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_4_scaffold_312_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22268..23152)
DNA (885bp) protein (295aa)
h16_A2951; ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4621967 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dppC4; dipeptide transport system permease DppC
13_1_20cm_4_scaffold_312_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23149..24069)
DNA (921bp) protein (307aa)
nickel-transporting ATPase (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter permease id=4621966 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter permease
Displaying items 1-30 of 38 in total

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