name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_20cm_4_scaffold_575_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
1..519
|
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase small; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] id=14626274 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
SAM-dependent methyltransferase (EC:2.1.1.-)
|
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13_1_20cm_4_scaffold_575_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(749..1546)
|
putative Zn-dependent hydrolase of beta-lactamase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4020049 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Zn-dependent hydrolase of beta-lactamase fold protein
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|
13_1_20cm_4_scaffold_575_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(1783..3090)
|
multi-sensor hybrid histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
Multi-sensor hybrid histidine kinase id=4020048 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
multi-sensor hybrid histidine kinase
|
|
13_1_20cm_4_scaffold_575_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3053..3736)
|
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4020045 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component sigma54 specific Fis family transcriptional regulator
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13_1_20cm_4_scaffold_575_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(3811..4791)
|
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=14626276 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Suspect SCG annotation. See neighboring gene [13_1_20cm_4_scaffold_575_6].
alanyl-tRNA synthetase
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13_1_20cm_4_scaffold_575_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(4788..6383)
|
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=14626276 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
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13_1_20cm_4_scaffold_575_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(6368..7930)
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pilT; Twitching mobility protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Twitching motility protein id=4140654 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
twitching motility protein
|
|
13_1_20cm_4_scaffold_575_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
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Not on your lists |
comp(7940..8959)
|
RecA; RecA/RadA recombinase; K03553 recombination protein RecA Tax=CSP1_6_Rokubacteria
Protein RecA id=4961431 bin=GWC2_Methylomirabilis_70_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
recA protein
|
|
13_1_20cm_4_scaffold_575_9
unknown
|
Not on your lists |
9072..9242
|
This feature has no annotations |
|
13_1_20cm_4_scaffold_575_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9253..9798)
|
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=14430507 bin=bin3_NC10 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
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|
13_1_20cm_4_scaffold_575_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9779..10582)
|
Putative uncharacterized protein n=1 Tax=Oryza sativa subsp. indica RepID=B8AG26_ORYSI
peptidase C14, caspase catalytic subunit p20 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
|
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13_1_20cm_4_scaffold_575_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(10579..11817)
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cinA; competence-damage inducible protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CinA-like protein id=4911882 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
cinA; competence-damage inducible protein
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|
13_1_20cm_4_scaffold_575_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(11814..12113)
|
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphatidylglycerophosphatase (EC:3.1.3.27)
Putative phosphatidyl-glycerophosphatase id=4911883 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 253 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_20cm_4_scaffold_575_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(12118..13431)
|
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal protein S12 methylthiotransferase RimO id=4104796 bin=GWF2_Methylomirabilis_70_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MiaB-like tRNA modifying enzyme YliG
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13_1_20cm_4_scaffold_575_15
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13631..15181)
|
BNR/Asp-box repeat-containing protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DVM5_9BURK
BNR/Asp-box repeat-containing protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
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13_1_20cm_4_scaffold_575_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15275..15772)
|
||
13_1_20cm_4_scaffold_575_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15808..16464)
|
Outer-membrane lipoprotein carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Outer membrane lipoprotein carrier protein LolA id=4911887 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Outer-membrane lipoprotein carrier protein
|
|
13_1_20cm_4_scaffold_575_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
16494..17267
|
Haloacid dehalogenase domain protein hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Haloacid dehalogenase-like hydrolase, putative id=4911888 bin=GWA2_Methylomirabilis_73_35 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloacid dehalogenase domain-containing protein hydrolase
|
|
13_1_20cm_4_scaffold_575_19 |
Not on your lists |
17345..19240
|
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003634B47
rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM90318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidase
|
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13_1_20cm_4_scaffold_575_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(19164..20567)
|
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Oligopeptide ABC transpoter oligopeptide-binding protein id=4192679 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein
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|
13_1_20cm_4_scaffold_575_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20618..21577
|
immunogenic protein precursor n=1 Tax=Bradyrhizobium japonicum RepID=UPI000375C4A1
Immunogenic protein {ECO:0000313|EMBL:EJZ30760.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CC
immunogenic protein precursor
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13_1_20cm_4_scaffold_575_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21636..21983)
|
UPF0060 membrane protein Csp_C23950 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCG6_9BURK
hypothetical protein; K09771 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
|
|
13_1_20cm_4_scaffold_575_23
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21980..22336)
|
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000346167F
Hypothetical conserved protein {ECO:0000313|EMBL:ABC93904.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
hypothetical protein
|
|
13_1_20cm_4_scaffold_575_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
22379..23011
|
sigW1; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated
ECF subfamily RNA polymerase sigma factor id=4878370 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
|
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13_1_20cm_4_scaffold_575_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
23008..23955
|
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
Putative uncharacterized protein id=4878369 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
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13_1_20cm_4_scaffold_575_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
24109..25524
|
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=4878368 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
hypothetical protein
|
|
13_1_20cm_4_scaffold_575_27
unknown
|
Not on your lists |
25572..26093
|
This feature has no annotations |
|
13_1_20cm_4_scaffold_575_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(26114..26638)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4984647 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_20cm_4_scaffold_575_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(26635..28818)
|
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cell division protein id=4104868 bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
cell division protein
|
|
13_1_20cm_4_scaffold_575_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(28818..28967)
|
metallo-beta-lactamase superfamily hydrolase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease J 1 (RNase J1) id=2399877 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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