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13_1_20cm_4_scaffold_8460

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_8460_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IQ28_DESMD
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
dehydrogenase
13_1_20cm_4_scaffold_8460_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(749..1498)
DNA (750bp) protein (250aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lactoylglutathione lyase and related lyases id=2216086 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative methylmalonyl-CoA epimerase
13_1_20cm_4_scaffold_8460_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1513..1971)
DNA (459bp) protein (153aa)
HAD-superfamily hydrolase (EC:3.1.3.41 3.6.1.22) Tax=GWA2_Rokubacteria_73_35_curated
HAD-superfamily hydrolase, subfamily IIA id=2216087 bin=GWA2_Methylomirabilis_73_35 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_8460_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2020..3144)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Predicted protein id=2216088 bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
NADP-dependent oxidoreductase domain protein
13_1_20cm_4_scaffold_8460_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3195..3557)
DNA (363bp) protein (121aa)
copper resistance protein CopC; K07156 Tax=GWA2_Rokubacteria_73_35_curated
Putative Copper resistance protein, copC family id=4737956 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC
13_1_20cm_4_scaffold_8460_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3554..4384)
DNA (831bp) protein (277aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative acetyltransferase id=4737960 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_8460_7
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

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4777..5037
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:JAE56386.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae
Os01g0742350 protein id=4737963 bin=GWA2_Methylomirabilis_73_35 species=Oryza sativa genus=Oryza taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_8460_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5466..7415)
DNA (1950bp) protein (650aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10 rbh
aldehyde:ferredoxin oxidoreductase
13_1_20cm_4_scaffold_8460_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7412..7702)
DNA (291bp) protein (97aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_8460_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7699..9009)
DNA (1311bp) protein (437aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4117240 bin=GWC2_Methylomirabilis_70_24 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fad-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_4_scaffold_8460_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9012..9332)
DNA (321bp) protein (107aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=14626792 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
13_1_20cm_4_scaffold_8460_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9583..9771
DNA (189bp) protein (63aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZQ7_KRIFD
Displaying 12 items

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