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13_1_20cm_4_scaffold_895

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_895_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZF6_RUBXD
Enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_895_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

716..1510
DNA (795bp) protein (265aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sora
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZE6_SORCE rbh
hypothetical protein
13_1_20cm_4_scaffold_895_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1516..2592
DNA (1077bp) protein (359aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase id=2432286 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_895_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2620..3045
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5032665 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_895_5
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3046..3840)
DNA (795bp) protein (265aa)
anti-sigma factor n=1 Tax=Pseudomonas RepID=UPI0003825D47
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD
transmembrane transcriptional regulator
13_1_20cm_4_scaffold_895_6
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3845..4390)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium fre
rpoE; RNA polymerase sigma-70 factor, sigma-E factor
13_1_20cm_4_scaffold_895_7
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4527..4859
DNA (333bp) protein (111aa)
Blue (Type 1) copper domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDY3_XANP2
Uncharacterized protein {ECO:0000313|EMBL:AJC22463.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.
hypothetical protein
13_1_20cm_4_scaffold_895_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4886..5803
DNA (918bp) protein (306aa)
Metallophosphoesterase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRM9_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF57500.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedos
metallophosphoesterase
13_1_20cm_4_scaffold_895_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5837..6799)
DNA (963bp) protein (321aa)
alpha/beta hydrolase superfamily esterase; K07001 NTE family protein Tax=GWA2_Rokubacteria_70_23_curated
Patatin id=2688476 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
patatin-like phospholipase
13_1_20cm_4_scaffold_895_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(6849..8264)
DNA (1416bp) protein (472aa)
rnb; exoribonuclease II (EC:3.1.13.1) Tax=RBG_13_Acidobacteria_68_16_curated
rnb; exoribonuclease II (EC:3.1.13.1)
Putative exoribonuclease II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM25_9BACT rbh
13_1_20cm_4_scaffold_895_11
unknown

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comp(8380..8532)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_4_scaffold_895_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8529..9083)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D3E19
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_895_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9184..10461
DNA (1278bp) protein (426aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein sce8293 id=2306499 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_895_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10458..11378
DNA (921bp) protein (307aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid aminotransferase id=3949866 bin=GWC2_Methylomirabilis_70_16 species=Vibrio splendidus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid aminotransferase
13_1_20cm_4_scaffold_895_15
Emmonsia crescens, Emmonsia, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

11416..12192
DNA (777bp) protein (259aa)
PREDICTED: uncharacterized protein LOC741359 n=1 Tax=Pan troglodytes RepID=UPI000292AD8D
Uncharacterized protein {ECO:0000313|EMBL:KKZ62169.1}; TaxID=1247875 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Emm
hypothetical protein
13_1_20cm_4_scaffold_895_16
unknown

Not on your lists

12215..12844
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_20cm_4_scaffold_895_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12846..13757
DNA (912bp) protein (304aa)
2-keto-3-deoxy-D-arabinonate dehydratase (EC:4.2.1.-); K01726 [EC:4.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fumarylacetoacetate (FAA) hydrolase id=3716441 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
fumarylacetoacetate (FAA) hydrolase
13_1_20cm_4_scaffold_895_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13761..14291
DNA (531bp) protein (177aa)
metal dependent phosphohydrolase with GAF sensor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Metal dependent phosphohydrolase with GAF sensor id=2772885 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase with GAF sensor
13_1_20cm_4_scaffold_895_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14327..14809)
DNA (483bp) protein (161aa)
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) id=3779763 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)
Displaying 19 items

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