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13_1_20cm_4_scaffold_12428

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_12428_1
unknown

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

401..1693
DNA (1293bp) protein (431aa)
Transcriptional regulator, SARP family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBI6_STRRD
SARP family transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
SARP family transcriptional regulator
13_1_20cm_4_scaffold_12428_3
unknown

Not on your lists

1697..2365
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2539..2952
DNA (414bp) protein (138aa)
CarD family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
Putative transcriptional regulator, Crp/Fnr family id=4074805 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_12428_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2962..3234
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2G1_VARPE
Uncharacterized protein {ECO:0000313|EMBL:KGM00624.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
13_1_20cm_4_scaffold_12428_6
unknown

Not on your lists

comp(3231..3455)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_7
unknown

Not on your lists

comp(3445..3657)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_8
unknown

Not on your lists

comp(3654..3908)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3972..4181)
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3K0_CONWI
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB52365.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Co
cold-shock protein
13_1_20cm_4_scaffold_12428_10
unknown

Not on your lists

4231..4566
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_11
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4556..4951)
DNA (396bp) protein (132aa)
endoribonuclease L-PSP n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002D7767E
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKG35459.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
endoribonuclease L-PSP
13_1_20cm_4_scaffold_12428_12
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists


comp(5025..5234)
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=RL31_PELLD
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelo
rpmE; 50S ribosomal protein L31
13_1_20cm_4_scaffold_12428_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5363..6064)
DNA (702bp) protein (234aa)
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B5C1FE
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
RpoD subfamily RNA polymerase sigma-70 subunit
13_1_20cm_4_scaffold_12428_14
unknown

Not on your lists

6295..7293
DNA (999bp) protein (333aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_15
unknown

Not on your lists

7424..8071
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_20cm_4_scaffold_12428_16
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8239..8505
DNA (267bp) protein (89aa)
Acylphosphatase {ECO:0000313|EMBL:KEP23093.1}; EC=3.6.1.7 {ECO:0000313|EMBL:KEP23093.1};; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037EAA62
acylphosphatase
13_1_20cm_4_scaffold_12428_17
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8552..10183
DNA (1632bp) protein (544aa)
Response regulator receiver protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HEH4_STRPR rbh
Response regulator receiver protein {ECO:0000313|EMBL:EDY65235.2}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaesp
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_12428_18
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10307..10912
DNA (606bp) protein (202aa)
portal protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628A40
Potassium uptake protein {ECO:0000313|EMBL:AIJ25390.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;
potassium uptake protein
Displaying 18 items

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