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13_1_20cm_4_scaffold_19831

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_19831_trna_1
unknown

Not on your lists

comp(12..95)
DNA (84bp)
transferRNA
13_1_20cm_4_scaffold_19831_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

133..2394
DNA (2262bp) protein (754aa)
Minor extracellular protease vpr n=1 Tax=Desmospora sp. 8437 RepID=F5SFT5_9BACL
peptidase S8 family protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_19831_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2391..2636)
DNA (246bp) protein (82aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_19831_3
unknown

Not on your lists

2705..2869
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_4
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2959..3357)
DNA (399bp) protein (133aa)
plasmid stabilization protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037A08A0
Plasmid stabilization protein {ECO:0000313|EMBL:KJY46167.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;
hypothetical protein
13_1_20cm_4_scaffold_19831_5
unknown

Not on your lists

comp(3385..3771)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_6
unknown

Not on your lists

comp(3789..4058)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_7
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4123..4461)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000374C92E
gas vesicle protein K Tax=RBG_13_Chloroflexi_56_8_curated
gas vesicle protein K
13_1_20cm_4_scaffold_19831_8
unknown

Not on your lists

comp(4466..5017)
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_9
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5014..5232)
DNA (219bp) protein (73aa)
gas vesicle protein GvpA n=1 Tax=Polaribacter franzmannii RepID=UPI000362FC05
Uncharacterized protein {ECO:0000313|EMBL:EAR13311.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
gas vesicle protein GvpA
13_1_20cm_4_scaffold_19831_10
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5229..6074)
DNA (846bp) protein (282aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LZT9_9NOCA
Gas vesicle synthesis protein {ECO:0000313|EMBL:CDZ89839.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein
13_1_20cm_4_scaffold_19831_11
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6071..6391)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035E8658
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (s
gvpJ1; gas vesicle synthesis protein
13_1_20cm_4_scaffold_19831_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6388..7089)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003831605
Uncharacterized protein {ECO:0000313|EMBL:EQD85351.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
hypothetical protein
13_1_20cm_4_scaffold_19831_13
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7180..7968)
DNA (789bp) protein (263aa)
Gas vesicle synthesis protein GvpL/GvpF n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J2F1_MYCSM
Gas vesicle synthesis protein GvpL/GvpF {ECO:0000313|EMBL:AGB25750.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegm
Gas vesicle synthesis protein GvpL/GvpF
13_1_20cm_4_scaffold_19831_14
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7972..8211)
DNA (240bp) protein (80aa)
gas vesicle protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B2E3C2
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcal
gas vesicle protein GVPa
13_1_20cm_4_scaffold_19831_15
unknown

Not on your lists

comp(8220..8681)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_16
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8685..8972)
DNA (288bp) protein (96aa)
gas vesicle protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000369F281
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcal
gvpA1; gas vesicle protein
13_1_20cm_4_scaffold_19831_17
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9019..9987)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NYK8_9ACTO
Cyclase/dehydrase {ECO:0000313|EMBL:EGE42687.1}; TaxID=649189 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus XylebKG-1.;"
cyclase/dehydrase
13_1_20cm_4_scaffold_19831_18
unknown

Not on your lists

10094..10579
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_4_scaffold_19831_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10474..11322)
DNA (849bp) protein (283aa)
Major facilitator superfamily MFS_1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEZ0_CONWI
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB51707.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
major facilitator superfamily protein
Displaying 20 items

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