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13_1_20cm_4_scaffold_7317

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_7317_1
RBG_16_Archaea_50_20_curated, Archaea

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1..504
DNA (504bp) protein (168aa)
Electron transfer flavoprotein alpha/beta-subunit n=2 Tax=mine drainage metagenome RepID=T1A7D5_9ZZZZ
electron transfer flavoprotein alpha/beta subunit Tax=RBG_16_Archaea_50_20_curated
electron transfer flavoprotein subunit alpha
13_1_20cm_4_scaffold_7317_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(501..1412)
DNA (912bp) protein (304aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteracea
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWJ4_RUBXD rbh
13_1_20cm_4_scaffold_7317_3
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1433..1825
DNA (393bp) protein (131aa)
Response regulator receiver domain protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QDJ6_9ACTO
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK54259.1}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propio
two component LuxR family transcriptional regulator
13_1_20cm_4_scaffold_7317_4
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1834..2451
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037F220D
Putative methyltransferase {ECO:0000313|EMBL:CCH77236.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_20cm_4_scaffold_7317_trna_1
unknown

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comp(2588..2660)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_7317_5
Nocardiopsis valliformis, Nocardiopsis, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2695..3462)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI0003451EDF
13_1_20cm_4_scaffold_7317_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3645..4277)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEN4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83146.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
ubiquinone/menaquinone biosynthesis methyltransferase
13_1_20cm_4_scaffold_7317_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4274..4975)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5M3_THECD
Uncharacterized protein {ECO:0000313|EMBL:ABP53872.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
hypothetical protein
13_1_20cm_4_scaffold_7317_8
unknown

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comp(4985..5401)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_4_scaffold_7317_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5611..6201)
DNA (591bp) protein (197aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DA160
porphobilinogen deaminase
13_1_20cm_4_scaffold_7317_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6410..7528)
DNA (1119bp) protein (373aa)
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RBG_16_Gamma2_65_34_curated
Glutamyl-tRNA reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0EAU4_9ACTN
glutamyl-tRNA reductase
13_1_20cm_4_scaffold_7317_11
unknown

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comp(7521..7718)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_4_scaffold_7317_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(7715..8404)
DNA (690bp) protein (230aa)
Cytochrome c assembly protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z5_CONWI
cytochrome C assembly protein; K02195 heme exporter protein C Tax=RBG_16_Actinobacteria_68_12_curated
cytochrome C assembly protein
13_1_20cm_4_scaffold_7317_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8582..8959
DNA (378bp) protein (126aa)
Cytochrome C-type biogenesis protein CcmE n=1 Tax=Selenomonas sp. CM52 RepID=J6I6R0_9FIRM
Cytochrome c-type biogenesis protein CcmE Tax=RBG_16_Actinobacteria_68_12_curated
CcmE/CycJ protein
13_1_20cm_4_scaffold_7317_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8967..9698
DNA (732bp) protein (244aa)
cytochrome C-type biogenesis protein; K02198 cytochrome c-type biogenesis protein CcmF Tax=RBG_16_Actinobacteria_68_12_curated
cycK; cytochrome c-type biogenesis protein cycK id=14424393 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c assembly protein
Displaying 15 items

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