ggKbase home page

13_1_20cm_4_scaffold_733

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_733_1
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Cold shock protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWK7_9PROT
cspG; bifunctional GMP synthase/glutamine amidotransferase protein Tax=CG_Mariprof_03
cold shock protein
13_1_20cm_4_scaffold_733_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

242..469
DNA (228bp) protein (76aa)
Translation initiation factor IF-1 n=1 Tax=Patulibacter medicamentivorans RepID=H0E8N3_9ACTN
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Actinobacteria_68_12_curated
translation initiation factor IF-1
13_1_20cm_4_scaffold_733_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(466..1215)
DNA (750bp) protein (250aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036C06AA
carboxymethylenebutenolidase
13_1_20cm_4_scaffold_733_4
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1221..2024)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QC30_CATAD
Uncharacterized protein {ECO:0000313|EMBL:KJS52450.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp.
hypothetical protein
13_1_20cm_4_scaffold_733_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2302..2688)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI00037730A6
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_20cm_4_scaffold_733_6
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2827..3540
DNA (714bp) protein (238aa)
Putative secreted protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJH0_STREN
Putative secreted protein {ECO:0000313|EMBL:AEW98704.1}; Secreted protein {ECO:0000313|EMBL:CCB72240.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomy
protein (fragment)
13_1_20cm_4_scaffold_733_7
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3578..4387)
DNA (810bp) protein (270aa)
sulfotransferase n=1 Tax=Salinispora pacifica RepID=UPI000379BFBE
Sulfotransferase {ECO:0000313|EMBL:AEB44093.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032)
sulfotransferase
13_1_20cm_4_scaffold_733_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4435..5274)
DNA (840bp) protein (280aa)
Sulfotransferase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T2Y1_MICAI
Sulfotransferase {ECO:0000313|EMBL:ADL49679.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC
sulfotransferase
13_1_20cm_4_scaffold_733_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5346..6560
DNA (1215bp) protein (405aa)
Putative domain HDIG-containing protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F664_DESDL
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGA68672.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" s
hypothetical protein
13_1_20cm_4_scaffold_733_10
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6679..8331
DNA (1653bp) protein (551aa)
Diguanylate cyclase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXC8_HERA2
Diguanylate cyclase {ECO:0000313|EMBL:ABX06848.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus
diguanylate cyclase
13_1_20cm_4_scaffold_733_11
unknown

Not on your lists

comp(8328..8597)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_4_scaffold_733_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8643..9731)
DNA (1089bp) protein (363aa)
Serine/threonine protein kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1B026_RUBXD
Serine/threonine protein kinase {ECO:0000313|EMBL:ABG03002.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source
serine/threonine protein kinase
13_1_20cm_4_scaffold_733_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10185..11243)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003785708 rbh
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EZP54192.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
sodium:proton exchanger
13_1_20cm_4_scaffold_733_14
unknown

Not on your lists

comp(11277..11963)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_20cm_4_scaffold_733_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12157..12921
DNA (765bp) protein (255aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI7_CONWI
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADB53825.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conex
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_4_scaffold_733_16
unknown

Not on your lists

comp(12963..13766)
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_20cm_4_scaffold_733_17
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13890..14588)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000382D9F4
Uncharacterized protein {ECO:0000313|EMBL:KJF17020.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxida
hypothetical protein
13_1_20cm_4_scaffold_733_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14647..16365
DNA (1719bp) protein (573aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FER8_CONWI rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB49742.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
ABC transporter
13_1_20cm_4_scaffold_733_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16532..17206)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI000349D473
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_1_20cm_4_scaffold_733_20
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17225..18802)
DNA (1578bp) protein (526aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Patulibacter americanus RepID=UPI0003B5E0C6 rbh
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ADV67798.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcu
RecQ familyATP-dependent DNA helicase
13_1_20cm_4_scaffold_733_21
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19007..21883)
DNA (2877bp) protein (959aa)
Putative regulatory protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E482_9ACTN rbh
Putative regulatory protein {ECO:0000313|EMBL:EHN11524.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacte
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_733_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22045..23415
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B4726 rbh
FAD linked oxidase domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
FAD/FMN-dependent dehydrogenase
13_1_20cm_4_scaffold_733_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23451..24389
DNA (939bp) protein (313aa)
alcohol dehydrogenase (EC:1.6.5.5)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035E8F51 rbh
Alcohol dehydrogenase, zinc-binding {ECO:0000313|EMBL:CEL13630.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium
13_1_20cm_4_scaffold_733_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24523..24894
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E509_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11238.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_1_20cm_4_scaffold_733_25
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24978..26126
DNA (1149bp) protein (383aa)
Hemolysin-type calcium-binding repeat protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GEZ2_9CYAN
Hemolysin-type calcium-binding repeat protein {ECO:0000313|EMBL:EKQ67508.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacte
calcium-binding protein
13_1_20cm_4_scaffold_733_26
unknown

Not on your lists

26212..26460
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_4_scaffold_733_27
unknown

Not on your lists

26453..26641
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_4_scaffold_733_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

26635..27024
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDH7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49551.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
Displaying 28 items

View Taxonomy