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13_1_20cm_4_scaffold_3956_10

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: comp(8146..8778)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DLS9_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 186.0
  • Bit_score: 121
  • Evalue 1.00e-24
Contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ13457.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064. UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 186.0
  • Bit_score: 128
  • Evalue 1.60e-26
amtR; TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 199.0
  • Bit_score: 114
  • Evalue 2.70e-23

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Taxonomy

Rhodococcus sp. MEB064 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGAAAAGGTCGAGCCGGAAGCGGCCGGGGCGCCGAGCGTCAGGGTCGACCAGGTGCTGGAGACGGCGACCCGGCTCTTCACCGAGCGCGGCTACGACGCCGCGAGCATCCGCGACCTGGCGGCGGCGCTCGCCATGCGACCCTCGTCCCTGTACCACCATTTCCCGGGAAAGCAGCACATCCTGTTTGCCATCTGCTTCGGCCTGCAGAGCGACTTCAACGCGGCGGTGATGCCGGTCTTCCACCAGGGCAAGGGACCGGTCGAGACGATCCAGGACGTGATCGGCGAGCACATTCGCTTCAGCCTGGCGCGCCGGGGCGAGGTGCTGGTCAACACGCGAGAGCGGCGGAGCCTTCCTCCCGACCTGCGCGCACAGGTCAACCGCCTGCGGCGCGCATACCGGGATGCCCTGGTGGCGGTGATCGAGCAGGGCCGGAGGCAGGGGCTCTTTAGCGTCGAGGACCCCAAGCTGGCCGCCATGGCGGTCTTCGACATGGTCAATGGGATGTTTCAATGGTTCCAGGCGCGCGATCAGGCGGACGTGGAACGCATCGCGACCACCTACGTCGACGCGGCGGTCGCCCTGCTGGGTGGCTGGGGCCGCCGCTATACTCTGACGAACGCTCGTTAG
PROTEIN sequence
Length: 211
MEKVEPEAAGAPSVRVDQVLETATRLFTERGYDAASIRDLAAALAMRPSSLYHHFPGKQHILFAICFGLQSDFNAAVMPVFHQGKGPVETIQDVIGEHIRFSLARRGEVLVNTRERRSLPPDLRAQVNRLRRAYRDALVAVIEQGRRQGLFSVEDPKLAAMAVFDMVNGMFQWFQARDQADVERIATTYVDAAVALLGGWGRRYTLTNAR*