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13_1_20cm_4_scaffold_3956

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3956_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17..775)
DNA (759bp) protein (253aa)
Dehydrogenase n=1 Tax=Saccharopolyspora erythraea D RepID=T2RZ24_SACER
short-chain dehydrogenase Tax=RBG_16_Gamma2_60_9_curated
short chain dehydrogenase/reductase oxidoreductase
13_1_20cm_4_scaffold_3956_2
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(777..1523)
DNA (747bp) protein (249aa)
Aminoglycoside phosphotransferase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HT33_MYCRH
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EHB59253.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae J
hypothetical protein
13_1_20cm_4_scaffold_3956_3
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1585..2139)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R812_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCK32411.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
hypothetical protein
13_1_20cm_4_scaffold_3956_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2165..3391)
DNA (1227bp) protein (409aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1G7_THIK1
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIF80539.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp
acyl-CoA dehydrogenase
13_1_20cm_4_scaffold_3956_5
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3472..4773)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MT76_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJF17792.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxida
putative ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_3956_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4804..5883)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000367BBB5
Inner-membrane translocator {ECO:0000313|EMBL:AEB44633.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain
inner-membrane translocator
13_1_20cm_4_scaffold_3956_7
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5886..6764)
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XKS8_9PSEU rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EHR61923.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocar
branched-chain amino acid ABC-type transport system, permease component
13_1_20cm_4_scaffold_3956_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6768..7349)
DNA (582bp) protein (194aa)
livF; branched-chain amino acid transport system ATP-binding protein (EC:3.6.3.30)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036AF99C
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CG_Rhodof_02
13_1_20cm_4_scaffold_3956_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7342..8127)
DNA (786bp) protein (262aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) {ECO:0000313|EMBL:CCH85996.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCH85996.1};; TaxID=1144889 species="Bacteria; Acti
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NA01_9ACTO
13_1_20cm_4_scaffold_3956_10
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8146..8778)
DNA (633bp) protein (211aa)
Regulatory protein TetR n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DLS9_9NOCA
Contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ13457.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.
amtR; TetR family transcriptional regulator
13_1_20cm_4_scaffold_3956_11
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8839..10005
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2P4_9FIRM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EKP95304.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Therm
acyl-CoA dehydrogenase
13_1_20cm_4_scaffold_3956_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10231..11427
DNA (1197bp) protein (399aa)
4-coumarate--CoA ligase {ECO:0000313|EMBL:AEN72609.1}; EC=6.2.1.12 {ECO:0000313|EMBL:AEN72609.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
13_1_20cm_4_scaffold_3956_13
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11431..11943
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036266FC
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KIH97888.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora
hypothetical protein
13_1_20cm_4_scaffold_3956_14
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11940..13100
DNA (1161bp) protein (387aa)
Luciferase-like, subgroup n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCL1_INTC7 rbh
Luciferase-like, subgroup {ECO:0000313|EMBL:ADU49615.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain AT
Luciferase-like, subgroup
13_1_20cm_4_scaffold_3956_15
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13079..13501
DNA (423bp) protein (141aa)
MaoC-like dehydratase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIA2_THEM7
MaoC-like dehydratase {ECO:0000313|EMBL:ADU51913.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Therma
MaoC-like dehydratase
13_1_20cm_4_scaffold_3956_16
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13498..13929
DNA (432bp) protein (144aa)
MaoC domain protein dehydratase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIA1_THEM7
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADU51912.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" sour
MaoC domain-containing protein dehydratase
13_1_20cm_4_scaffold_3956_17
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13926..14684
DNA (759bp) protein (253aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADU51911.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADU51911.1};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIA0_THEM7
13_1_20cm_4_scaffold_3956_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

14665..16173
DNA (1509bp) protein (503aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
Carboxylesterase (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVX2_9CHLR
Displaying 18 items

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