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13_1_20cm_4_scaffold_3930

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3930_1
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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84..293
DNA (210bp) protein (70aa)
30S ribosomal protein S14 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362FA2E
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" s
30S ribosomal protein S14
13_1_20cm_4_scaffold_3930_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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451..849
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000381D136
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (str
rpsH; 30S ribosomal protein S8
13_1_20cm_4_scaffold_3930_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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989..1528
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380CC42
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
rplF; 50S ribosomal protein L6
13_1_20cm_4_scaffold_3930_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1546..1911
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037CFB00
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
50S ribosomal protein L18
13_1_20cm_4_scaffold_3930_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


1997..2506
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS5_KORVE
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
rpsE; 30S ribosomal protein S5
13_1_20cm_4_scaffold_3930_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2568..2771
DNA (204bp) protein (68aa)
50S ribosomal protein L30 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL30_KORVE
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
50S ribosomal protein L30
13_1_20cm_4_scaffold_3930_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


2836..3273
DNA (438bp) protein (146aa)
50S ribosomal protein L15 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL15_KORVE
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
rplO; 50S ribosomal protein L15
13_1_20cm_4_scaffold_3930_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


3273..4658
DNA (1386bp) protein (462aa)
Protein translocase subunit SecY n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISA2_KORVE rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koriba
protein translocase subunit secY/sec61 alpha
13_1_20cm_4_scaffold_3930_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4778..5482
DNA (705bp) protein (235aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISA1_KORVE
adenylate kinase
13_1_20cm_4_scaffold_3930_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5528..6103
DNA (576bp) protein (192aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISA0_KORVE
methionine aminopeptidase
13_1_20cm_4_scaffold_3930_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6259..6477
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
infA; translation initiation factor IF-1
13_1_20cm_4_scaffold_3930_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6517..6630
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL36_ACIC5
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
rpmJ; 50S ribosomal protein L36
13_1_20cm_4_scaffold_3930_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6678..7064
DNA (387bp) protein (129aa)
30S ribosomal protein S13 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RS13_ACIC5
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
rpsM; 30S ribosomal protein S13
13_1_20cm_4_scaffold_3930_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


7162..7596
DNA (435bp) protein (145aa)
30S ribosomal protein S11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS11_KORVE
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
30S ribosomal protein S11
13_1_20cm_4_scaffold_3930_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


7710..8339
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS4_KORVE rbh
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
30S ribosomal protein S4
13_1_20cm_4_scaffold_3930_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8515..9435
DNA (921bp) protein (307aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RPOA_KORVE
DNA-directed RNA polymerase subunit alpha
Displaying 16 items

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