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13_1_20cm_4_scaffold_4425

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4425_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1..1494
DNA (1494bp) protein (498aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INW6_KORVE
Outer membrane receptor protein {ECO:0000313|EMBL:CDM66992.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB-dependent receptor
13_1_20cm_4_scaffold_4425_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1588..1965
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK9_KORVE
Response regulator receiver protein {ECO:0000313|EMBL:ABF43291.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
response regulator receiver protein
13_1_20cm_4_scaffold_4425_3
unknown

Not on your lists

comp(1969..2202)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_4_scaffold_4425_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2224..2565)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=unclassified Latescibacteria RepID=UPI00037894FC
gas vesicle protein G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gas vesicle protein G
13_1_20cm_4_scaffold_4425_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2635..3537)
DNA (903bp) protein (301aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41402.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
gas vesicle synthesis GvpLGvpF
13_1_20cm_4_scaffold_4425_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3566..4063)
DNA (498bp) protein (166aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE
PAS/PAC sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_4425_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4102..5571)
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE
PAS/PAC sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_4425_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5637..5939)
DNA (303bp) protein (101aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
gas vesicle protein GvpA
13_1_20cm_4_scaffold_4425_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5971..6312)
DNA (342bp) protein (114aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
gas vesicle protein GvpA
13_1_20cm_4_scaffold_4425_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6545..6880)
DNA (336bp) protein (112aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
Gas vesicle K {ECO:0000313|EMBL:ABF41407.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
gas vesicle K
13_1_20cm_4_scaffold_4425_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6905..7543)
DNA (639bp) protein (213aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ2_KORVE
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41408.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
gas vesicle synthesis GvpLGvpF
13_1_20cm_4_scaffold_4425_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7584..8879)
DNA (1296bp) protein (432aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:CDM66807.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDM66807.1};; TaxID=454194 species="Bacteria; Acidobact
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378E2E1 rbh
13_1_20cm_4_scaffold_4425_13
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

8985..9425
DNA (441bp) protein (147aa)
protein-S-isoprenylcysteine methyltransferase (EC:2.1.1.100)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035F4E68
hypothetical protein Tax=GWF2_Elusimicrobia_62_30_curated
13_1_20cm_4_scaffold_4425_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9432..9701)
DNA (270bp) protein (90aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
Octanoyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=LIPB_KORVE
lipoate-protein ligase B
13_1_20cm_4_scaffold_4425_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9769..10119)
DNA (351bp) protein (117aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
Octanoyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=LIPB_KORVE
lipoate-protein ligase B
13_1_20cm_4_scaffold_4425_16

Not on your lists

comp(10187..10405)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000380E976
Marine sediment metagenome DNA, contig: S03H2_L02933 {ECO:0000313|EMBL:GAH35372.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_4_scaffold_4425_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10613..12028)
DNA (1416bp) protein (472aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Dihydrolipoyl dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ6_KORVE rbh
dihydrolipoamide dehydrogenase
13_1_20cm_4_scaffold_4425_18
unknown

Not on your lists

comp(12364..12807)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_4_scaffold_4425_19
unknown

Not on your lists

13045..13185
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_4_scaffold_4425_20
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

13266..13559
DNA (294bp) protein (98aa)
Marine sediment metagenome DNA, contig: S01H4_S03841 Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
Displaying 20 items

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