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13_1_20cm_4_scaffold_862

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_862_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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71..661
DNA (591bp) protein (197aa)
Ribosome-recycling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV34_KORVE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=204669 species="Bacteria;
ribosome recycling factor
13_1_20cm_4_scaffold_862_2
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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710..1291
DNA (582bp) protein (194aa)
Putative transcriptional regulator protein YobU n=1 Tax=Paenibacillus alvei DSM 29 RepID=K5A7W1_PAEAL
Putative transcriptional regulator protein YobU {ECO:0000313|EMBL:EJW16678.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillu
araC; araC family transcriptional regulator
13_1_20cm_4_scaffold_862_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1356..2831
DNA (1476bp) protein (492aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD5_KORVE
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
13_1_20cm_4_scaffold_862_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3587..4270)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHB7_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43733.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_4_scaffold_862_5
unknown

Not on your lists

4393..4710
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_4_scaffold_862_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4682..5392
DNA (711bp) protein (237aa)
Peptidase C26 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH4_KORVE
Peptidase C26 {ECO:0000313|EMBL:ABF39126.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
peptidase C26
13_1_20cm_4_scaffold_862_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5421..6428)
DNA (1008bp) protein (336aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA3_KORVE rbh
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABF39197.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
zinc-binding alcohol dehydrogenase
13_1_20cm_4_scaffold_862_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6612..7694
DNA (1083bp) protein (361aa)
PilT protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA6_KORVE
PilT protein-like protein {ECO:0000313|EMBL:ABF39194.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
twitching motility protein PilT
13_1_20cm_4_scaffold_862_9
unknown

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comp(7700..8215)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_4_scaffold_862_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8339..9067
DNA (729bp) protein (243aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA7_KORVE
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_4_scaffold_862_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9236..9589
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVX4_ACISM
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_20cm_4_scaffold_862_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9667..10173
DNA (507bp) protein (169aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F762_ACIC5
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
13_1_20cm_4_scaffold_862_13
unknown

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10511..10909
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_4_scaffold_862_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10979..14506
DNA (3528bp) protein (1176aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=204669 species="Bacteria; Ac
Transcription-repair-coupling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE rbh
transcription-repair coupling factor
13_1_20cm_4_scaffold_862_15

Not on your lists

14588..16309
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F22E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH99418.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_4_scaffold_862_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16358..16600
DNA (243bp) protein (81aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; Flags: Precurs
UDP-glucose pyrophosphorylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV0_KORVE
UDP-glucose pyrophosphorylase
Displaying 16 items

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