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13_1_20cm_4_scaffold_934

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_934_1

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comp(3..899)
DNA (897bp) protein (299aa)
Sugar phosphate isomerase/epimerase n=1 Tax=mine drainage metagenome RepID=E6QL90_9ZZZZ
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CBI08010.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sugar phosphate isomerase/epimerase
13_1_20cm_4_scaffold_934_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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1154..2188
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C9C5D rbh
Putative gluconolactonase {ECO:0000313|EMBL:BAL98587.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM
putative gluconolactonase
13_1_20cm_4_scaffold_934_3
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

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2600..3418
DNA (819bp) protein (273aa)
Alr3897 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQD6_NOSS1
Alr3897 protein {ECO:0000313|EMBL:BAB75596.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
hypothetical protein
13_1_20cm_4_scaffold_934_trna_2
unknown

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comp(3804..3876)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_934_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3975..5165)
DNA (1191bp) protein (397aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00624}; EC=2.7.7.27 {ECO:0000255|HAMAP-Rule:MF_00624};; ADP-glucose pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00624}; Short=ADPGlc
Glucose-1-phosphate adenylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GLGC_KORVE
glgC; glucose-1-phosphate adenylyltransferase
13_1_20cm_4_scaffold_934_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5239..6276)
DNA (1038bp) protein (346aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI48_SINAD
PAS domain S-box {ECO:0000313|EMBL:AGA29069.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
PAS domain-containing protein
13_1_20cm_4_scaffold_934_6
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6521..7228
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381C014
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL87617.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="
metalloendopeptidase-like membrane protein
13_1_20cm_4_scaffold_934_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7421..11767)
DNA (4347bp) protein (1449aa)
ATP dependent helicase, Lhr family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK30_KORVE rbh
ATP dependent helicase, Lhr family {ECO:0000313|EMBL:ABF42770.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
DEAD/DEAH box helicase rbh
13_1_20cm_4_scaffold_934_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12090..13952
DNA (1863bp) protein (621aa)
DNA mismatch repair protein MutL n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MUTL_KORVE
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
DNA mismatch repair protein MutL
13_1_20cm_4_scaffold_934_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14075..14944
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM9_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42221.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_4_scaffold_934_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14992..15702
DNA (711bp) protein (237aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM8_KORVE
cytidylate kinase
13_1_20cm_4_scaffold_934_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15826..16341
DNA (516bp) protein (172aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kori
translation initiation factor 3
13_1_20cm_4_scaffold_934_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


16375..16704
DNA (330bp) protein (110aa)
50S ribosomal protein L35 n=2 Tax=Candidatus Koribacter RepID=RL35_KORVE
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
50S ribosomal protein L35
13_1_20cm_4_scaffold_934_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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16861..17226
DNA (366bp) protein (122aa)
50S ribosomal protein L20 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL20_ACIC5
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
rplT; 50S ribosomal protein L20
13_1_20cm_4_scaffold_934_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


17469..18578
DNA (1110bp) protein (370aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS9_KORVE
phenylalanyl-tRNA synthetase subunit alpha
13_1_20cm_4_scaffold_934_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18701..20656
DNA (1956bp) protein (652aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS7_KORVE
phenylalanyl-tRNA synthetase subunit beta
13_1_20cm_4_scaffold_934_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20686..21564
DNA (879bp) protein (293aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ABF40429.1}; EC=4.1.3.4 {ECO:0000313|EMBL:ABF40429.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRS1_KORVE rbh
hydroxymethylglutaryl-CoA lyase
13_1_20cm_4_scaffold_934_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(21577..22911)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E2171
Uncharacterized protein {ECO:0000313|EMBL:ABJ87851.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_4_scaffold_934_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

23017..24015
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00038111AD
Uncharacterized protein {ECO:0000313|EMBL:ABJ87850.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_4_scaffold_934_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(24047..25105)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YX4_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ85141.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_4_scaffold_934_20

Not on your lists

comp(25226..26686)
DNA (1461bp) protein (487aa)
Alpha-glucosidase 2 {ECO:0000313|EMBL:CBI07148.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBI07148.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainag
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037ADFF5
Alpha-glucosidase
13_1_20cm_4_scaffold_934_21

Not on your lists

comp(26628..27509)
DNA (882bp) protein (294aa)
Alpha-glucosidase 2 {ECO:0000313|EMBL:CBI07148.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBI07148.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainag
alpha-glucosidase 2 (EC:3.2.1.20)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037ADFF5
13_1_20cm_4_scaffold_934_trna_1
unknown

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comp(27548..27621)
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_934_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27874..28782
DNA (909bp) protein (303aa)
YdjC-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC0_KORVE
YdjC-like protein {ECO:0000313|EMBL:ABF43030.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Elli
protein YebG
13_1_20cm_4_scaffold_934_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28834..29505
DNA (672bp) protein (224aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKW4_KORVE
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF42486.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
type IV pilus assembly PilZ
13_1_20cm_4_scaffold_934_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29563..30723
DNA (1161bp) protein (387aa)
Glycosyl transferase, group 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB9_KORVE
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABF43031.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
group 1 glycosyl transferase
13_1_20cm_4_scaffold_934_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(30809..31930)
DNA (1122bp) protein (374aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB8_KORVE
sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_934_26
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(31989..33098)
DNA (1110bp) protein (370aa)
Threonine synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V743_TERSS
Threonine synthase {ECO:0000313|EMBL:ADV81683.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853
threonine synthase
13_1_20cm_4_scaffold_934_27
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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33200..34225
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000374DB2E rbh
ATP dependent DNA ligase {ECO:0000313|EMBL:ACB77413.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90
ligC; ATP-dependent DNA ligase
13_1_20cm_4_scaffold_934_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(34230..34970)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003601E6F rbh
TPR repeat protein {ECO:0000313|EMBL:ABF43035.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
hypothetical protein
Displaying items 1-30 of 38 in total

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